PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG004490.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 446aa MW: 51010.7 Da PI: 8.4191

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004490.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.5	2.9e-20	63	149	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + tf Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7BG004490.3 63 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTFSCSRYGKAQSNSGN---MLKPSRTVGTGCKAKINITRAPDGRFHLSTVILDHNHALSP 149 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MDDGIGGVQE SSDMSISSDD DGIKQQRESN VELAHDRAEA HPDGLLREPE VGMSFGTETE 60 VREYYNTYAK AKGFGVTRRS SNRDDNGQLK YLTFSCSRYG KAQSNSGNML KPSRTVGTGC 120 KAKINITRAP DGRFHLSTVI LDHNHALSPL KPRRFRCNKK LDFRVKRRLE LNDPAEIRVN 180 KSSTIPRVTH FDIEKQFQSA YTNSKFKEFQ EELTQTMYCD RKLMQKEGAI ETYEITEDVL 240 IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH VLCVLTHKKI KEVPPQYVLD 300 RSKKNVNRKH NFIRCTYGGM EDTPAAERFD RLCNSFYPVA EIGSMSDDSC NALIEELRTL 360 KIRFSSNSSS ENGKEHVATR EDAHSNGKTT SKNIPSPIAV RCAGCPPSLR KESMLDKLIC 420 QASEKKKEAE QKVLLHILRL FVSYFL

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MDDGIGGVQE SSDMSISSDD DGIKQQRESN VELAHDRAEA HPDGLLREPE VGMSFGTETE  60
VREYYNTYAK AKGFGVTRRS SNRDDNGQLK YLTFSCSRYG KAQSNSGNML KPSRTVGTGC  120
KAKINITRAP DGRFHLSTVI LDHNHALSPL KPRRFRCNKK LDFRVKRRLE LNDPAEIRVN  180
KSSTIPRVTH FDIEKQFQSA YTNSKFKEFQ EELTQTMYCD RKLMQKEGAI ETYEITEDVL  240
IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH VLCVLTHKKI KEVPPQYVLD  300
RSKKNVNRKH NFIRCTYGGM EDTPAAERFD RLCNSFYPVA EIGSMSDDSC NALIEELRTL  360
KIRFSSNSSS ENGKEHVATR EDAHSNGKTT SKNIPSPIAV RCAGCPPSLR KESMLDKLIC  420
QASEKKKEAE QKVLLHILRL FVSYFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	169	RRFRCNKKLDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.3	8e-18	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004490.3