PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG004490.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 436aa MW: 49963.4 Da PI: 8.5204

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004490.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.6	2.8e-20	55	141	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + tf Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7BG004490.12 55 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTFSCSRYGKAQSNSGN---MLKPSRTVGTGCKAKINITRAPDGRFHLSTVILDHNHALSP 141 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
QESSDMSISS DDDGIKQQRE SNVELAHDRA EAHPDGLLRE PEVGMSFGTE TEVREYYNTY 60 AKAKGFGVTR RSSNRDDNGQ LKYLTFSCSR YGKAQSNSGN MLKPSRTVGT GCKAKINITR 120 APDGRFHLST VILDHNHALS PLKPRRFRCN KKLDFRVKRR LELNDPAEIR VNKSSTIPRV 180 THFDIEKQFQ SAYTNSKFKE FQEELTQTMY CDRKLMQKEG AIETYEITED VLIDEDKGWR 240 KDIVHHVYFS EEEFEVKCSC RRFEFTGILC RHVLCVLTHK KIKEVPPQYV LDRSKKNVNR 300 KHNFIRCTYG GMEDTPAAER FDRLCNSFYP VAEIGSMSDD SCNALIEELR TLKIRFSSNS 360 SSENGKEHVA TREDAHSNGK TTSKNIPSPI AVRCAGCPPS LRKESMLDKL ICQASEKKKE 420 AEQKGFLHKF EQEKAP

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

QESSDMSISS DDDGIKQQRE SNVELAHDRA EAHPDGLLRE PEVGMSFGTE TEVREYYNTY  60
AKAKGFGVTR RSSNRDDNGQ LKYLTFSCSR YGKAQSNSGN MLKPSRTVGT GCKAKINITR  120
APDGRFHLST VILDHNHALS PLKPRRFRCN KKLDFRVKRR LELNDPAEIR VNKSSTIPRV  180
THFDIEKQFQ SAYTNSKFKE FQEELTQTMY CDRKLMQKEG AIETYEITED VLIDEDKGWR  240
KDIVHHVYFS EEEFEVKCSC RRFEFTGILC RHVLCVLTHK KIKEVPPQYV LDRSKKNVNR  300
KHNFIRCTYG GMEDTPAAER FDRLCNSFYP VAEIGSMSDD SCNALIEELR TLKIRFSSNS  360
SSENGKEHVA TREDAHSNGK TTSKNIPSPI AVRCAGCPPS LRKESMLDKL ICQASEKKKE  420
AEQKGFLHKF EQEKAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	161	RRFRCNKKLDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	7e-18	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004490.12