PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG004490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 493aa MW: 56145.5 Da PI: 8.3356

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.6	2.6e-20	63	149	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + tf Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7BG004490.1 63 EYYNTYAKAKGFGVTRRSSHRD-DNGQLKYLTFSCSRYGKAQSNSGN---MLKPSRTAGTGCKAKINITRAPDGRFHLSTVILDHNHTLSP 149 69*************99998.8899************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MDDGISGFQE SSDMSISSDG DGIKQRKESN VELAHGLAEA QSDGSLGEPE VGMTFDTENE 60 VREYYNTYAK AKGFGVTRRS SHRDDNGQLK YLTFSCSRYG KAQSNSGNML KPSRTAGTGC 120 KAKINITRAP DGRFHLSTVI LDHNHTLSPP KPRRFRCNKK LDFCVKRSLE LNDPAEIRVS 180 KSSTIPRVTH FDIEKQFQSA YTNLRFKEFQ EELTQTMYCD RKLMQKEGAI EMYEITEDVL 240 IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH VLCVLTHKKI KEVPPQYVFD 300 RWKKNVNRKH NFIRCTYGGM EDTLAAERFD RLCNSFYPVA EIGAMSDDSC NALMEELHTL 360 KIRFSSNSSS ENGKEHVATR EDAPLNGKTT SKTTPSPIAV RCARCPPSPR KQSMLDKLIC 420 QANEKKKEAE QKASSTNLNK KRPRKNRKSS VDDILEQHVM EHSSQQPVCL DGPASSITSQ 480 LYLFLIFLFV ANT

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MDDGISGFQE SSDMSISSDG DGIKQRKESN VELAHGLAEA QSDGSLGEPE VGMTFDTENE  60
VREYYNTYAK AKGFGVTRRS SHRDDNGQLK YLTFSCSRYG KAQSNSGNML KPSRTAGTGC  120
KAKINITRAP DGRFHLSTVI LDHNHTLSPP KPRRFRCNKK LDFCVKRSLE LNDPAEIRVS  180
KSSTIPRVTH FDIEKQFQSA YTNLRFKEFQ EELTQTMYCD RKLMQKEGAI EMYEITEDVL  240
IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH VLCVLTHKKI KEVPPQYVFD  300
RWKKNVNRKH NFIRCTYGGM EDTLAAERFD RLCNSFYPVA EIGAMSDDSC NALMEELHTL  360
KIRFSSNSSS ENGKEHVATR EDAPLNGKTT SKTTPSPIAV RCARCPPSPR KQSMLDKLIC  420
QANEKKKEAE QKASSTNLNK KRPRKNRKSS VDDILEQHVM EHSSQQPVCL DGPASSITSQ  480
LYLFLIFLFV ANT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	2e-18	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004490.1