PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG004310.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 744aa MW: 85058.5 Da PI: 6.7811

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004310.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.7	1.5e-21	49	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y++++GFsvrk k+++ ++ i +++++Cskeg + +e + +++ +r+ trt+Cka+++ + +++g+w v++++ HnH+la TRIDC7BG004310.7 49 LYCDYGHRIGFSVRKGKQSYFIGTRDIRTKDYYCSKEGLKYDEPVT--EANFNRPDTRTNCKAMVRFRVDEKGRWTVIRFVPLHNHQLA 135 7******************9999************99988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
GSQEELLRMR KNGEEGKKGE DHGNALSRKE ATEELIGCMV HSEEEAYKLY CDYGHRIGFS 60 VRKGKQSYFI GTRDIRTKDY YCSKEGLKYD EPVTEANFNR PDTRTNCKAM VRFRVDEKGR 120 WTVIRFVPLH NHQLAKPGER HLLRSAKSFA VGKSGVIDPA ESAESHAMNG SSDRTVGDIS 180 EPPGYTTRDC YNHDNVQNIT LIGAGDSQSL VSYFKRRTNE EGMFYWDVQV DQEGRMTNFF 240 FRDGKSRSDY DCFGDAVIFD TTYRTNKYSL ICAPFVGVNH HWHNVVFGFA FLLDDSTASY 300 VWLFKSFLES MGGQSPKSIF TDQDEAIMQA AEQVFPNTQH CFSYWHILKN AQSHLGTVNT 360 SQAFQNMFMK CMQGCDTEME LQESWDAMLD EYKLQDNDWL NGLYKFHNRW CSVFNEDTFD 420 GGINSSQWGE VSNNILTGIA DESTSLTRFS LLVEKVVKTL RRNESEEDFR CSQTAPVRAI 480 KHSTVLKQAA ESYTHRMYKL FEAEFLDGCG ATSCHENSCG GSLLRFEITM QGRGSKMWTV 540 LLDTSTMEIS CGCRKFERMG LLCSHALKAF SLQNVDMVPE KYILKRWTKD ARRSMYNLNQ 600 EDSTQQECTE AELAYRNRAM QYAYNLALKS QELEEARKIF WDSLETGEKA LEVFFEMRSL 660 HAQSAKDAST REKKKKKIPK GPSTKKAKQA LASSSAAPVL TAQTNEQQFQ SAQDANGNAT 720 IGRSYYYQVH INMYEILSFL LAFK

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

GSQEELLRMR KNGEEGKKGE DHGNALSRKE ATEELIGCMV HSEEEAYKLY CDYGHRIGFS  60
VRKGKQSYFI GTRDIRTKDY YCSKEGLKYD EPVTEANFNR PDTRTNCKAM VRFRVDEKGR  120
WTVIRFVPLH NHQLAKPGER HLLRSAKSFA VGKSGVIDPA ESAESHAMNG SSDRTVGDIS  180
EPPGYTTRDC YNHDNVQNIT LIGAGDSQSL VSYFKRRTNE EGMFYWDVQV DQEGRMTNFF  240
FRDGKSRSDY DCFGDAVIFD TTYRTNKYSL ICAPFVGVNH HWHNVVFGFA FLLDDSTASY  300
VWLFKSFLES MGGQSPKSIF TDQDEAIMQA AEQVFPNTQH CFSYWHILKN AQSHLGTVNT  360
SQAFQNMFMK CMQGCDTEME LQESWDAMLD EYKLQDNDWL NGLYKFHNRW CSVFNEDTFD  420
GGINSSQWGE VSNNILTGIA DESTSLTRFS LLVEKVVKTL RRNESEEDFR CSQTAPVRAI  480
KHSTVLKQAA ESYTHRMYKL FEAEFLDGCG ATSCHENSCG GSLLRFEITM QGRGSKMWTV  540
LLDTSTMEIS CGCRKFERMG LLCSHALKAF SLQNVDMVPE KYILKRWTKD ARRSMYNLNQ  600
EDSTQQECTE AELAYRNRAM QYAYNLALKS QELEEARKIF WDSLETGEKA LEVFFEMRSL  660
HAQSAKDAST REKKKKKIPK GPSTKKAKQA LASSSAAPVL TAQTNEQQFQ SAQDANGNAT  720
IGRSYYYQVH INMYEILSFL LAFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-98	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004310.7