PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7BG004310.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 749aa MW: 85619 Da PI: 6.7811

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004310.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.7	1.5e-21	54	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y++++GFsvrk k+++ ++ i +++++Cskeg + +e + +++ +r+ trt+Cka+++ + +++g+w v++++ HnH+la TRIDC7BG004310.4 54 LYCDYGHRIGFSVRKGKQSYFIGTRDIRTKDYYCSKEGLKYDEPVT--EANFNRPDTRTNCKAMVRFRVDEKGRWTVIRFVPLHNHQLA 140 7******************9999************99988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MDTRPGSQEE LLRMRKNGEE GKKGEDHGNA LSRKEATEEL IGCMVHSEEE AYKLYCDYGH 60 RIGFSVRKGK QSYFIGTRDI RTKDYYCSKE GLKYDEPVTE ANFNRPDTRT NCKAMVRFRV 120 DEKGRWTVIR FVPLHNHQLA KPGERHLLRS AKSFAVGKSG VIDPAESAES HAMNGSSDRT 180 VGDISEPPGY TTRDCYNHDN VQNITLIGAG DSQSLVSYFK RRTNEEGMFY WDVQVDQEGR 240 MTNFFFRDGK SRSDYDCFGD AVIFDTTYRT NKYSLICAPF VGVNHHWHNV VFGFAFLLDD 300 STASYVWLFK SFLESMGGQS PKSIFTDQDE AIMQAAEQVF PNTQHCFSYW HILKNAQSHL 360 GTVNTSQAFQ NMFMKCMQGC DTEMELQESW DAMLDEYKLQ DNDWLNGLYK FHNRWCSVFN 420 EDTFDGGINS SQWGEVSNNI LTGIADESTS LTRFSLLVEK VVKTLRRNES EEDFRCSQTA 480 PVRAIKHSTV LKQAAESYTH RMYKLFEAEF LDGCGATSCH ENSCGGSLLR FEITMQGRGS 540 KMWTVLLDTS TMEISCGCRK FERMGLLCSH ALKAFSLQNV DMVPEKYILK RWTKDARRSM 600 YNLNQEDSTQ QECTEAELAY RNRAMQYAYN LALKSQELEE ARKIFWDSLE TGEKALEVFF 660 EMRSLHAQSA KDASTREKKK KKIPKGPSTK KAKQALASSS AAPVLTAQTN EQQFQSAQDA 720 NGNATIGRSY YYQVFPTPMQ PNQIFMHPN

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MDTRPGSQEE LLRMRKNGEE GKKGEDHGNA LSRKEATEEL IGCMVHSEEE AYKLYCDYGH  60
RIGFSVRKGK QSYFIGTRDI RTKDYYCSKE GLKYDEPVTE ANFNRPDTRT NCKAMVRFRV  120
DEKGRWTVIR FVPLHNHQLA KPGERHLLRS AKSFAVGKSG VIDPAESAES HAMNGSSDRT  180
VGDISEPPGY TTRDCYNHDN VQNITLIGAG DSQSLVSYFK RRTNEEGMFY WDVQVDQEGR  240
MTNFFFRDGK SRSDYDCFGD AVIFDTTYRT NKYSLICAPF VGVNHHWHNV VFGFAFLLDD  300
STASYVWLFK SFLESMGGQS PKSIFTDQDE AIMQAAEQVF PNTQHCFSYW HILKNAQSHL  360
GTVNTSQAFQ NMFMKCMQGC DTEMELQESW DAMLDEYKLQ DNDWLNGLYK FHNRWCSVFN  420
EDTFDGGINS SQWGEVSNNI LTGIADESTS LTRFSLLVEK VVKTLRRNES EEDFRCSQTA  480
PVRAIKHSTV LKQAAESYTH RMYKLFEAEF LDGCGATSCH ENSCGGSLLR FEITMQGRGS  540
KMWTVLLDTS TMEISCGCRK FERMGLLCSH ALKAFSLQNV DMVPEKYILK RWTKDARRSM  600
YNLNQEDSTQ QECTEAELAY RNRAMQYAYN LALKSQELEE ARKIFWDSLE TGEKALEVFF  660
EMRSLHAQSA KDASTREKKK KKIPKGPSTK KAKQALASSS AAPVLTAQTN EQQFQSAQDA  720
NGNATIGRSY YYQVFPTPMQ PNQIFMHPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-98	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004310.4