PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG004100.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 227aa    MW: 25163.4 Da    PI: 9.5544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG004100.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.91.4e-16854455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  TRIDC7BG004100.2  8 VHNLSEKRRRSRINEKMKALQSLIPNS-----NKTDKASMLDEAIEYLKQLQ 54
                      6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
KRTRAAEVHN LSEKRRRSRI NEKMKALQSL IPNSNKTDKA SMLDEAIEYL KQLQLQVQML  60
SMRNGVYLNP SYLSGALEPM QASQMFAALG VSGRNVAAPS SGAVAPPVNQ SSGAHHPFDP  120
MNSQQNQPQP LVLPSCPKTT ISEPPFHLES SQSHLQSFQL PESSELMLRG DIMLKHHLTS  180
AQDRADPSGN KMNSLRQEST MLNTHFDGCS RSKEQSHDMV PANTRHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-39bHLH family protein