PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG004100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 266aa    MW: 27501.7 Da    PI: 10.0424
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG004100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.51.8e-1684130455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  TRIDC7BG004100.1  84 VHNLSEKRRRSRINEKMKALQSLIPNS-----NKTDKASMLDEAIEYLKQLQ 130
                       6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
AGAGADAAGA AAAAGGGGGG GAAPDVRGRR RVPRGGGRGR AGPAAAAPAG GGAGGSSEPE  60
PHGASDRPRG GGGSGSKRTR AAEVHNLSEK RRRSRINEKM KALQSLIPNS NKTDKASMLD  120
EAIEYLKQLQ LQVQMLSMRN GVYLNPSYLS GALEPMQASQ MFAALGVSGR NVAAPSSGAV  180
APPVNQSSGA HHPFDPMNSQ QNQPQPLVLP SCPKTTISEP PFHLESSQSH LQSFQLPESS  240
EVTQVLIFYC TEASGRFFSQ HAFFCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.17e-37bHLH family protein