PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG003190.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 95aa    MW: 10979.7 Da    PI: 10.08
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG003190.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.42.2e-29150251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      ri+nk  rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7BG003190.4  1 RIDNKVSRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 50
                      79**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
RIDNKVSRQV TFAKRRNGLL KKAYELSVLC DAEVALIIFS TRGRLFEFST SSCMYKTLER  60
YRSCNFNSEA TATPKTELVT FSTYALDRFN ISFLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.34e-36MIKC_MADS family protein