PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG003190.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 61aa    MW: 6965.15 Da    PI: 11.0568
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG003190.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.11.5e-30959151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
             SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                       kri+nk  rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7BG003190.15  9 KRIDNKVSRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 59
                       79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MGRSKVELKR IDNKVSRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGRLFEFSTS  60
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03710.36e-33MIKC_MADS family protein