PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG003190.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 112aa    MW: 13158.2 Da    PI: 10.1826
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG003190.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.78.8e-30252151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
             SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                       kri+nk  rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7BG003190.10  2 KRIDNKVSRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 52
                       79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
LKRIDNKVSR QVTFAKRRNG LLKKAYELSV LCDAEVALII FSTRGRLFEF STSSCMYKTL  60
ERYRSCNFNS EATATPKTEL SNYQEYLKLK TELSSYRQLR EIFLARTWAH LT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.32e-41MIKC_MADS family protein