PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG002920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 260aa    MW: 29981.9 Da    PI: 6.8819
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG002920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.13.5e-12179225147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +g WT eE+ l++++    G g Wk I++++ + Rt+ q+ s+ qky
  TRIDC7BG002920.1 179 KGFWTLEEHRLFLHGLSACGRGKWKDISKYFVTSRTPAQISSHAQKY 225
                       688*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
YLSSFYPTLI SFPQKKPQIS SMNQRVNQEW NPSEVEGARS IISRLSNYYN NDGTSHERNN  60
KHDIVANLKA WFPRKTMQQV TDLYDDLIME MHILQCPEKE YNGTNSDHGV IYSVDGLVNK  120
NFGLQNEVAM EGMGILFGRP LESVRTMAIQ EELQMIEENK VVLENKMCIP QPVLAPRAKG  180
FWTLEEHRLF LHGLSACGRG KWKDISKYFV TSRTPAQISS HAQKYFMRLQ SKGSGSQRYS  240
INDVELDDAD PWKMENSFNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10580.22e-21MYB_related family protein