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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG077080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 280aa MW: 32438.2 Da PI: 8.4247 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 72 | 1.4e-22 | 70 | 150 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA +vGFs+rk+++k++ ++g+i++++ vCs++g+re++++k +trt+C+a+++ + +k+g w v+k++++HnH la TRIDC7AG077080.1 70 DMYNTYAGKVGFSIRKNQTKRR-DDGTIYQKRIVCSNQGHRETDSSK--------DTTRTDCNARIQFSVSKKGIWTVQKVVTDHNHYLA 150 58**************998776.9999**************998877........99******************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
ESSRCSNLYR PSYTMSEATT CTMDLPPPQV MSGGGQQDDA VTDGRGENGE QTIQVPEVGK 60 TFESEKDAYD MYNTYAGKVG FSIRKNQTKR RDDGTIYQKR IVCSNQGHRE TDSSKDTTRT 120 DCNARIQFSV SKKGIWTVQK VVTDHNHYLA SPNKVHKLRS QRRVIEADRH LIGQIREAGM 180 KPSRVYDFMV AFYGGPDKVP FSKMDCNNEI GRERKKYLES NDLQTLLEYL KNKQREDPTF 240 FYAIQVDEKD GRIANFFWAD DRSEYKFNKK WHELLDQYNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-40 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG077080.1 |