PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG075770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 188aa MW: 21220.6 Da PI: 8.6508 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.7 | 7.7e-12 | 17 | 59 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L TRIDC7AG075770.1 17 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 59 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
PASRKKRVEG MPSKNLMAER RRRKRLNDRL SMLRSVVPKI SKMDRTSILG DTIDYMKELL 60 ERIRRLQEEM EEPHAGPAAA PLLSVFRELN PNEMLARNTP KFEVERKEED TRVEIYCAAK 120 PGLLLSTVST LDTLGLDIQQ CVVSCFNDFA MHASCSEVPT IPQPTSKHGW ILLLSSAPPS 180 VQPPIPTD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 25 | RKKRVEGMPSKNLMAERRRRKR |
2 | 5 | 26 | RKKRVEGMPSKNLMAERRRRKR |
3 | 19 | 26 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 2e-46 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG075770.1 |