PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072790.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 879aa MW: 94999.8 Da PI: 7.9956

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072790.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	22	3.4e-07	197	214	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072790.5 197 CGVHRCKVTCHEGECPPC 214 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 879 aa Download sequence
LGKADPAAKG DDDDDVATRC PHVCVLQCHP GPCPPCKAFA PERPCPCGKQ SITRRCADRS 60 TPVTCGQRCE KLLPCRRHRC EKVCHTGPCG DCEVNFPAQC FCGKKTETLL CGEMVLKGKL 120 SNKDGVFSCS EVCGHNLACR NHACQDVCHP GPCGECELLP GKVTTCHCGK TRLQEKRASC 180 LDPIPTCDKV CDKRLPCGVH RCKVTCHEGE CPPCLVRVEQ RCRCGSSGQM VECYKVSMEE 240 FRCNKPCGRK KNCGRHRCSE CCCPLSKPFA QHQGDSMDPH FCQIPCGKKL RCGQHGCQHL 300 CHSGHCDPCR ETIFHDLTCA CGRTSIPPPQ PCGTPTPSCP HQCMVPQPCG HPASHQCHFG 360 DCPPCVVPVT RECVGGHVML RNIPCGSKDI RCNQPCGKNR QCGLHACART CHPAPCDPPP 420 ANGEASSSSG GRVSCGQLCG VPRRECKHTC NAPCHPSSPC PDVRCEHRVT ITCSCGRITT 480 AVPCSAGGAY NGDSAFDISV MQQLPMPLQP VESNGKRVPL GQRKLCCDEE CAKMERKRVL 540 AEAFDITPPN LDALHFGENS NASDLLSDLF RREPKWVLAI EERCKFLVLG KTKGNSSSNI 600 KFHVFCHMMK DKRDAIRLIA DRWKLSVQAV GWEPKRFITV HVTPKSKVPA RVLGSKPGVP 660 VSASHPYFDP MVDMDPRLVV AMLDLPRDAD VSSLVLRFGG ECELVWLNDK NAAAVFSDPA 720 RAATALRRLD YGSAYQGAAM FCPSSITQAS VPSNVWIGAQ RDGGLAAKSS ANPWKASQSE 780 PDPSGDWTVL SHASGSVWKR GDTPAQVMGS SNRWNALESD AATSSGPTNK RKPPLRTETG 840 SSSSAPRVGA GSSAAPSAGQ SVSKLQPDVE VEDWEESCE

Sequence ? help Back to Top

Protein Sequence Length: 879 aa Download sequence

LGKADPAAKG DDDDDVATRC PHVCVLQCHP GPCPPCKAFA PERPCPCGKQ SITRRCADRS  60
TPVTCGQRCE KLLPCRRHRC EKVCHTGPCG DCEVNFPAQC FCGKKTETLL CGEMVLKGKL  120
SNKDGVFSCS EVCGHNLACR NHACQDVCHP GPCGECELLP GKVTTCHCGK TRLQEKRASC  180
LDPIPTCDKV CDKRLPCGVH RCKVTCHEGE CPPCLVRVEQ RCRCGSSGQM VECYKVSMEE  240
FRCNKPCGRK KNCGRHRCSE CCCPLSKPFA QHQGDSMDPH FCQIPCGKKL RCGQHGCQHL  300
CHSGHCDPCR ETIFHDLTCA CGRTSIPPPQ PCGTPTPSCP HQCMVPQPCG HPASHQCHFG  360
DCPPCVVPVT RECVGGHVML RNIPCGSKDI RCNQPCGKNR QCGLHACART CHPAPCDPPP  420
ANGEASSSSG GRVSCGQLCG VPRRECKHTC NAPCHPSSPC PDVRCEHRVT ITCSCGRITT  480
AVPCSAGGAY NGDSAFDISV MQQLPMPLQP VESNGKRVPL GQRKLCCDEE CAKMERKRVL  540
AEAFDITPPN LDALHFGENS NASDLLSDLF RREPKWVLAI EERCKFLVLG KTKGNSSSNI  600
KFHVFCHMMK DKRDAIRLIA DRWKLSVQAV GWEPKRFITV HVTPKSKVPA RVLGSKPGVP  660
VSASHPYFDP MVDMDPRLVV AMLDLPRDAD VSSLVLRFGG ECELVWLNDK NAAAVFSDPA  720
RAATALRRLD YGSAYQGAAM FCPSSITQAS VPSNVWIGAQ RDGGLAAKSS ANPWKASQSE  780
PDPSGDWTVL SHASGSVWKR GDTPAQVMGS SNRWNALESD AATSSGPTNK RKPPLRTETG  840
SSSSAPRVGA GSSAAPSAGQ SVSKLQPDVE VEDWEESCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072790.5