PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072430.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1023aa MW: 110951 Da PI: 8.069

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072430.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.1	5.8e-06	410	427	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072430.5 410 CGLHRCKGTCHEGECPPC 427 ****************** PP
2	zf-NF-X1	16.6	1.7e-05	615	631	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7AG072430.5 615 CGLHACARPCHPSPCDP 631 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1023 aa Download sequence
XXXXXXXXXX XXXXNAAPLL PLPNPNPNPA SDSRPPRRRQ RRPNHNDGRA PPPQERAPPS 60 APANANASAP RQMRANAPAY APRHERANAS APAPAAAAGG GAVPQLVQEI QDKLARGAVE 120 CMICYDMVRR SAPVWSCGSC FAIFHLPCIR RWARSPASAS DDPASDSWRC PGCQSVQDVP 180 ARDIAYTCFC RRRRDPPNDL YLTPHSCGEP CSKPLDRADP AAKGDDDDVA TRCPHLCVLQ 240 CHPGPCPPCK AFAPERPCPC GKQSITRRCA DRITAVTCGQ SCEKLLPCGR HHCDKVCHTG 300 PCGECEVDYP ALCFCGKKTE TLLCGEMVLK GKLSDKDGVF SCSEVCGHKL ACANHACQDV 360 CHPGPCGECE LMPAKVTTCH CGKTRLQEKR TSCLDPIATC DKVCDKRLPC GLHRCKGTCH 420 EGECPPCLVR VEQRCRCGSS GQMVECYKVS KEEFCCNKPC GRKKNCGRHR CSECCCPLSK 480 PFAQHQGESM DPHFCQIPCG KKLRCGQHGC QHLCHSGHCD PCRETIFNDL SCACGRSSIP 540 PPQPCGTPTP SCPHQCIVPQ PCGHPASHQC HFGDCPPCVV PVMRECVGGH VMLRNIPCGS 600 KDIRCNQPCG KNRQCGLHAC ARPCHPSPCD PPPTNGEASS SSGGKVSCGQ LCGVPRRECK 660 HTCNAPCHPS SPCPDVRCEH RATITCSCGR ISTTVPCSAG GAYNGDSTFD ISVIQQLPMP 720 LQPVESNGKR VPLGQRKLCC DEECAKVERK RVLAEAFDIT QPNLDALHFG ENSNASDLVS 780 DLFRREPKWV LAIEERCKFL VLGKTRGNSS SNMKFHVFCH MMKDKRDAIR LIADRWKLSV 840 QAVGWEPKRF VTVHVTPKSK VPARVLGSKP GVPVSAAHPY FDPMVDMDPR LVVAMLDLPR 900 DADVNSLVLR FGGECELVWL NDKNAAAVFS DPARAATALR RLDYGSAYQG AAMFCPSSIT 960 QASLSSNVWV GAPRDGGLAA VSSASPWKKD SPSEDKCAWS FPRISVETCC SGHEFKPVEC 1020 SGV

Sequence ? help Back to Top

Protein Sequence Length: 1023 aa Download sequence

XXXXXXXXXX XXXXNAAPLL PLPNPNPNPA SDSRPPRRRQ RRPNHNDGRA PPPQERAPPS  60
APANANASAP RQMRANAPAY APRHERANAS APAPAAAAGG GAVPQLVQEI QDKLARGAVE  120
CMICYDMVRR SAPVWSCGSC FAIFHLPCIR RWARSPASAS DDPASDSWRC PGCQSVQDVP  180
ARDIAYTCFC RRRRDPPNDL YLTPHSCGEP CSKPLDRADP AAKGDDDDVA TRCPHLCVLQ  240
CHPGPCPPCK AFAPERPCPC GKQSITRRCA DRITAVTCGQ SCEKLLPCGR HHCDKVCHTG  300
PCGECEVDYP ALCFCGKKTE TLLCGEMVLK GKLSDKDGVF SCSEVCGHKL ACANHACQDV  360
CHPGPCGECE LMPAKVTTCH CGKTRLQEKR TSCLDPIATC DKVCDKRLPC GLHRCKGTCH  420
EGECPPCLVR VEQRCRCGSS GQMVECYKVS KEEFCCNKPC GRKKNCGRHR CSECCCPLSK  480
PFAQHQGESM DPHFCQIPCG KKLRCGQHGC QHLCHSGHCD PCRETIFNDL SCACGRSSIP  540
PPQPCGTPTP SCPHQCIVPQ PCGHPASHQC HFGDCPPCVV PVMRECVGGH VMLRNIPCGS  600
KDIRCNQPCG KNRQCGLHAC ARPCHPSPCD PPPTNGEASS SSGGKVSCGQ LCGVPRRECK  660
HTCNAPCHPS SPCPDVRCEH RATITCSCGR ISTTVPCSAG GAYNGDSTFD ISVIQQLPMP  720
LQPVESNGKR VPLGQRKLCC DEECAKVERK RVLAEAFDIT QPNLDALHFG ENSNASDLVS  780
DLFRREPKWV LAIEERCKFL VLGKTRGNSS SNMKFHVFCH MMKDKRDAIR LIADRWKLSV  840
QAVGWEPKRF VTVHVTPKSK VPARVLGSKP GVPVSAAHPY FDPMVDMDPR LVVAMLDLPR  900
DADVNSLVLR FGGECELVWL NDKNAAAVFS DPARAATALR RLDYGSAYQG AAMFCPSSIT  960
QASLSSNVWV GAPRDGGLAA VSSASPWKKD SPSEDKCAWS FPRISVETCC SGHEFKPVEC  1020
SGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072430.5