PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG072430.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 862aa MW: 92961.9 Da PI: 7.9765

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG072430.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	16.1	2.4e-05	114	136	2	18
zf-NF-X1 2 G......kHkCqklCHeGpCppC 18 G +H Cq CH+GpC++C TRIDC7AG072430.1 114 GhklacaNHACQDVCHPGPCGEC 136 55555559*************** PP
2	zf-NF-X1	18.4	4.8e-06	177	194	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7AG072430.1 177 CGLHRCKGTCHEGECPPC 194 ****************** PP
3	zf-NF-X1	16.9	1.4e-05	382	398	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7AG072430.1 382 CGLHACARPCHPSPCDP 398 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 862 aa Download sequence
PHLCVLQCHP GPCPPCKAFA PERPCPCGKQ SITRRCADRI TAVTCGQSCE KLLPCGRHHC 60 DKVCHTGPCG ECEVDYPALC FCGKKTETLL CGEMVLKGKL SDKDGVFSCS EVCGHKLACA 120 NHACQDVCHP GPCGECELMP AKVTTCHCGK TRLQEKRTSC LDPIATCDKV CDKRLPCGLH 180 RCKGTCHEGE CPPCLVRVEQ RCRCGSSGQM VECYKVSKEE FCCNKPCGRK KNCGRHRCSE 240 CCCPLSKPFA QHQGESMDPH FCQIPCGKKL RCGQHGCQHL CHSGHCDPCR ETIFNDLSCA 300 CGRSSIPPPQ PCGTPTPSCP HQCIVPQPCG HPASHQCHFG DCPPCVVPVM RECVGGHVML 360 RNIPCGSKDI RCNQPCGKNR QCGLHACARP CHPSPCDPPP TNGEASSSSG GKVSCGQLCG 420 VPRRECKHTC NAPCHPSSPC PDVRCEHRAT ITCSCGRIST TVPCSAGGAY NGDSTFDISV 480 IQQLPMPLQP VESNGKRVPL GQRKLCCDEE CAKVERKRVL AEAFDITQPN LDALHFGENS 540 NASDLVSDLF RREPKWVLAI EERCKFLVLG KTRGNSSSNM KFHVFCHMMK DKRDAIRLIA 600 DRWKLSVQAV GWEPKRFVTV HVTPKSKVPA RVLGSKPGVP VSAAHPYFDP MVDMDPRLVV 660 AMLDLPRDAD VNSLVLRFGG ECELVWLNDK NAAAVFSDPA RAATALRRLD YGSAYQGAAM 720 FCPSSITQAS LSSNVWVGAP RDGGLAAVSS ASPWKKDSPS ELKPNPHAVM TVLGRAPGTS 780 VLGHSPGSVW KPAVQVTSSN RWNALESDAA TSSGSTDKPK PRLRTDTGSS TSAPGVGAEP 840 SAGQSVSKLQ PDIEVEDWEE IV

Sequence ? help Back to Top

Protein Sequence Length: 862 aa Download sequence

PHLCVLQCHP GPCPPCKAFA PERPCPCGKQ SITRRCADRI TAVTCGQSCE KLLPCGRHHC  60
DKVCHTGPCG ECEVDYPALC FCGKKTETLL CGEMVLKGKL SDKDGVFSCS EVCGHKLACA  120
NHACQDVCHP GPCGECELMP AKVTTCHCGK TRLQEKRTSC LDPIATCDKV CDKRLPCGLH  180
RCKGTCHEGE CPPCLVRVEQ RCRCGSSGQM VECYKVSKEE FCCNKPCGRK KNCGRHRCSE  240
CCCPLSKPFA QHQGESMDPH FCQIPCGKKL RCGQHGCQHL CHSGHCDPCR ETIFNDLSCA  300
CGRSSIPPPQ PCGTPTPSCP HQCIVPQPCG HPASHQCHFG DCPPCVVPVM RECVGGHVML  360
RNIPCGSKDI RCNQPCGKNR QCGLHACARP CHPSPCDPPP TNGEASSSSG GKVSCGQLCG  420
VPRRECKHTC NAPCHPSSPC PDVRCEHRAT ITCSCGRIST TVPCSAGGAY NGDSTFDISV  480
IQQLPMPLQP VESNGKRVPL GQRKLCCDEE CAKVERKRVL AEAFDITQPN LDALHFGENS  540
NASDLVSDLF RREPKWVLAI EERCKFLVLG KTRGNSSSNM KFHVFCHMMK DKRDAIRLIA  600
DRWKLSVQAV GWEPKRFVTV HVTPKSKVPA RVLGSKPGVP VSAAHPYFDP MVDMDPRLVV  660
AMLDLPRDAD VNSLVLRFGG ECELVWLNDK NAAAVFSDPA RAATALRRLD YGSAYQGAAM  720
FCPSSITQAS LSSNVWVGAP RDGGLAAVSS ASPWKKDSPS ELKPNPHAVM TVLGRAPGTS  780
VLGHSPGSVW KPAVQVTSSN RWNALESDAA TSSGSTDKPK PRLRTDTGSS TSAPGVGAEP  840
SAGQSVSKLQ PDIEVEDWEE IV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG072430.1