PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG070060.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 814aa MW: 94235.7 Da PI: 9.3304

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG070060.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.3	3.1e-24	123	213	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Yn+YA+ GFsvr + +++ k ++e++ r+f+Cskeg+r e+ + t+++r++ra t++gCka+l+++ + +g+w v+k++ HnH+la TRIDC7AG070060.2 123 HYNRYARAKGFSVRLDDKEYVKGTREVKARRFCCSKEGHRLEKYFQaTDQKREPRALTHCGCKAMLEIQHDAgRGQWFVKKFVDVHNHPLA 213 6*************************************999877689999****************9**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
WGRRAPFHTP VRPRECGRPT SRAPPSDTSA HHRRLPSRST FFDPATRVLP SPALQWFLPP 60 PPADAPTRRI ILGCAATCQT IACRIIREQV WRMDGHSASL EEIEEYHMMV SQMFASEKQG 120 YEHYNRYARA KGFSVRLDDK EYVKGTREVK ARRFCCSKEG HRLEKYFQAT DQKREPRALT 180 HCGCKAMLEI QHDAGRGQWF VKKFVDVHNH PLADPDQSAF LRSHRRMNDA HKADAVEYRL 240 GGLRTFQIMN VAKKQNGGYP HVGYICRDLY NFFAKYKKKR ILGRDADFVL NHMRVQEERD 300 AEFFFKYTTD DEGHLRNLFW ADSQSQIDYE AFGDVVVFDS TYRVNRYNLP FVAFVGLNHH 360 RSTVVFGIGV VSDETHKSYE WLLQTFVEAM GHKEPISVIT DGDSAMRKAI RKILPRTDHR 420 LCSWHIEQNM IRHLRNPMLD DFKKLIYCRM GVYQFEKSWA EFKANYEIEE ENEWMSRMYK 480 LRKKLAAAYT KGRYFLGMQS NQHSESLNSR LHNHLDRKMS LVDVVEHTEH CISRMRRNEA 540 ELDAICSQSV PFTRIDACLL EINAARIYTA KIFKMVRDCI RRSCAWVIQE QTTVNDLVRY 600 EVVLKDGAEG GSRRLFSVEC SFDGSLMNGA FCPCRKMECE AIPCAHIFAV LVFVGAATIP 660 PCCVNKRLTM EAKAAFMSVR NANTHVWSEK MSRYRELRNI ASMALFKVSK SGERSQQVKD 720 YLQSIIDGPI ENDDNTEETT FGPIPSHYSA ASQASAERVL DPKIVDTKGA PCKKRMKPFH 780 ETLRETNRRK KRTRSCGQCK SSEHDRRKCP DLGK

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

WGRRAPFHTP VRPRECGRPT SRAPPSDTSA HHRRLPSRST FFDPATRVLP SPALQWFLPP  60
PPADAPTRRI ILGCAATCQT IACRIIREQV WRMDGHSASL EEIEEYHMMV SQMFASEKQG  120
YEHYNRYARA KGFSVRLDDK EYVKGTREVK ARRFCCSKEG HRLEKYFQAT DQKREPRALT  180
HCGCKAMLEI QHDAGRGQWF VKKFVDVHNH PLADPDQSAF LRSHRRMNDA HKADAVEYRL  240
GGLRTFQIMN VAKKQNGGYP HVGYICRDLY NFFAKYKKKR ILGRDADFVL NHMRVQEERD  300
AEFFFKYTTD DEGHLRNLFW ADSQSQIDYE AFGDVVVFDS TYRVNRYNLP FVAFVGLNHH  360
RSTVVFGIGV VSDETHKSYE WLLQTFVEAM GHKEPISVIT DGDSAMRKAI RKILPRTDHR  420
LCSWHIEQNM IRHLRNPMLD DFKKLIYCRM GVYQFEKSWA EFKANYEIEE ENEWMSRMYK  480
LRKKLAAAYT KGRYFLGMQS NQHSESLNSR LHNHLDRKMS LVDVVEHTEH CISRMRRNEA  540
ELDAICSQSV PFTRIDACLL EINAARIYTA KIFKMVRDCI RRSCAWVIQE QTTVNDLVRY  600
EVVLKDGAEG GSRRLFSVEC SFDGSLMNGA FCPCRKMECE AIPCAHIFAV LVFVGAATIP  660
PCCVNKRLTM EAKAAFMSVR NANTHVWSEK MSRYRELRNI ASMALFKVSK SGERSQQVKD  720
YLQSIIDGPI ENDDNTEETT FGPIPSHYSA ASQASAERVL DPKIVDTKGA PCKKRMKPFH  780
ETLRETNRRK KRTRSCGQCK SSEHDRRKCP DLGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	773	792	KKRMKPFHETLRETNRRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-88	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG070060.2