PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG069870.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 470aa MW: 52966.5 Da PI: 6.5469

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG069870.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.8	1.2e-10	33	114	11	97
HHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 11 lksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ + +++ + a+ h ++++e +++le ++gr++ vk+ g +vl++GW +Fvk ++++++ ++ F + g+s+f v++ TRIDC7AG069870.1 33 FADH-MRIRPPVAS-HlrNLITE-FEEIQLEAPDGRVYPVKI--GWEFGDIVLRSGWHDFVKVHHIEQNSSIRFVYRGNSSF--EVHIS 114 4444.777777774.45766654.469*************..5555679***********************99..66555 PP
2	B3	38.2	2.5e-12	366	465	1	100
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TT.HHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkG.WkeFvkangLkegDfvvFkldgrsefel 92 f+kv ++s v ++ l+l ++a+++ + +++ l d + r W+ l rk+ ++ ++ +G W +F ++ gL+e D+++F+l+++s+ ++ TRIDC7AG069870.1 366 FVKVVSSSEVVTKTSLYLGPEYASACLLTQPGR-LRLLLDGDDRDWDCMLGLRKSNKTWWIDRGaWPKFISDVGLEEDDICLFELTDTSSLTM 457 89**********************6665553.5667899*****998888887777666****************999* PP EEEEE-SS CS B3 93 vvkvfrks 100 +v+v+rks TRIDC7AG069870.1 458 KVHVIRKS 465 ***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
DGCQECEWWR LHCYWSHAGD HPRQFSLVAG DDFADHMRIR PPVASHLRNL ITEFEEIQLE 60 APDGRVYPVK IGWEFGDIVL RSGWHDFVKV HHIEQNSSIR FVYRGNSSFE VHISDSPGHG 120 NSSPPPPRDC HVPNEQVVPD PAHVQTPINI DYTAFPGTRL SHEQEKKVLE LAQRSMRSEF 180 RLHVAAVNKR NANGDCHVYI PLTLLDSFKE GITEAPIQLK AHSNDMIYVV GASKHGDDQV 240 ILQSKLSHFV DGHRMQDNDL LVFRSKGKAQ LEVLVLDPSG CEKTWFDTGN SSNVSREGRR 300 AQAQNTASTS FGWAKSGLQA RESNEAGLQA PRSNNYISTQ STPLHSQQKE KVEERVRAIG 360 SQFPVFVKVV SSSEVVTKTS LYLGPEYASA CLLTQPGRLR LLLDGDDRDW DCMLGLRKSN 420 KTWWIDRGAW PKFISDVGLE EDDICLFELT DTSSLTMKVH VIRKSDIPAP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

DGCQECEWWR LHCYWSHAGD HPRQFSLVAG DDFADHMRIR PPVASHLRNL ITEFEEIQLE  60
APDGRVYPVK IGWEFGDIVL RSGWHDFVKV HHIEQNSSIR FVYRGNSSFE VHISDSPGHG  120
NSSPPPPRDC HVPNEQVVPD PAHVQTPINI DYTAFPGTRL SHEQEKKVLE LAQRSMRSEF  180
RLHVAAVNKR NANGDCHVYI PLTLLDSFKE GITEAPIQLK AHSNDMIYVV GASKHGDDQV  240
ILQSKLSHFV DGHRMQDNDL LVFRSKGKAQ LEVLVLDPSG CEKTWFDTGN SSNVSREGRR  300
AQAQNTASTS FGWAKSGLQA RESNEAGLQA PRSNNYISTQ STPLHSQQKE KVEERVRAIG  360
SQFPVFVKVV SSSEVVTKTS LYLGPEYASA CLLTQPGRLR LLLDGDDRDW DCMLGLRKSN  420
KTWWIDRGAW PKFISDVGLE EDDICLFELT DTSSLTMKVH VIRKSDIPAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-08	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG069870.1