PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7AG064340.20

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 726aa MW: 80843.1 Da PI: 6.3305

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG064340.20	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.8	4.9e-24	44	145	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++p++ ae+ ++++++ +l +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F TRIDC7AG064340.20 44 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 131 99***************************96555544..8********************************************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 ++++ +l+++++r+ TRIDC7AG064340.20 132 WNDNNQLLLGIRRA 145 777777899997 PP
2	Auxin_resp	116.7	2e-38	170	253	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k TRIDC7AG064340.20 170 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 253 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MHADAETDEV YAQMTLQPLN PQELKDPYLP AELGTANKQP TNYFCKTLTA SDTSTHGGFS 60 VPRRAAEKVF PPLDFTMQPP AQELFAKDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK 120 RLVAGDSVLF IWNDNNQLLL GIRRATRPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF 180 TIFYNPRASP CEFVIPLAKY VKAVYHTRIS VGMRFRMLFE TEESSVRRYM GTITGISDLD 240 DVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPTPFPLRL KRPWPTGLPS 300 LHGGKDDDLT SSLMWLRDSA NPGFQSLNFG GAGMNPWMQP RLDASLLGLQ PDIYQTMAAA 360 AFQDPTKMSP TMLQFQQPQN MVGRATPLLQ SQILQQMQPQ FQQQSYLQNM NGTTIQGQAQ 420 SEFLQQQLQR CQSFNEQKPQ LLQQQESNQQ QSQGPQSSPT ALQTALPFSQ SQSFSDTNMS 480 SLSPSGAPAM HNTLGPFSSE TASHLSMSRP TAVPVPDSWS SKRVAVESLI PSRPQSTTHM 540 EQLSSTPPSI PQSSALAPLP GRGCLVDQDG SSDPQNHLLF GVNIDSHSLL MQGGLHDEND 600 STTLNSSGCL DESGYVPCSH TPDQVNQPPA TFVKVYKSGT YGRSLDITKF SNYHELRREL 660 GRLFGLEGQL EDPMRSGWQL VFVDREEDVL LVGDDPWQEF VNSVSCIKIL SPQEVQQMGK 720 QGLELL

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MHADAETDEV YAQMTLQPLN PQELKDPYLP AELGTANKQP TNYFCKTLTA SDTSTHGGFS  60
VPRRAAEKVF PPLDFTMQPP AQELFAKDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK  120
RLVAGDSVLF IWNDNNQLLL GIRRATRPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF  180
TIFYNPRASP CEFVIPLAKY VKAVYHTRIS VGMRFRMLFE TEESSVRRYM GTITGISDLD  240
DVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPTPFPLRL KRPWPTGLPS  300
LHGGKDDDLT SSLMWLRDSA NPGFQSLNFG GAGMNPWMQP RLDASLLGLQ PDIYQTMAAA  360
AFQDPTKMSP TMLQFQQPQN MVGRATPLLQ SQILQQMQPQ FQQQSYLQNM NGTTIQGQAQ  420
SEFLQQQLQR CQSFNEQKPQ LLQQQESNQQ QSQGPQSSPT ALQTALPFSQ SQSFSDTNMS  480
SLSPSGAPAM HNTLGPFSSE TASHLSMSRP TAVPVPDSWS SKRVAVESLI PSRPQSTTHM  540
EQLSSTPPSI PQSSALAPLP GRGCLVDQDG SSDPQNHLLF GVNIDSHSLL MQGGLHDEND  600
STTLNSSGCL DESGYVPCSH TPDQVNQPPA TFVKVYKSGT YGRSLDITKF SNYHELRREL  660
GRLFGLEGQL EDPMRSGWQL VFVDREEDVL LVGDDPWQEF VNSVSCIKIL SPQEVQQMGK  720
QGLELL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.2	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG064340.20