PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG064340.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 818aa    MW: 90610.6 Da    PI: 6.3157
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG064340.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.8e-2444145199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC7AG064340.2  44 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 132
                       99*****************************96555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7AG064340.2 133 NDNNQLLLGIRRA 145
                       777778**99997 PP
2Auxin_resp116.52.3e-38170253183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7AG064340.2 170 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDDVRWPNSHWRSVK 253
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 818 aa     Download sequence    
MHADAETDEV YAQMTLQPLN PQELKDPYLP AELGTANKQP TNYFCKTLTA SDTSTHGGFS  60
VPRRAAEKVF PPLDFTMQPP AQELFAKDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK  120
RLVAGDSVLF IWNDNNQLLL GIRRATRPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF  180
TIFYNPRASP CEFVIPLAKY VKAVYHTRIS VGMRFRMLFE TEESSVRRYM GTITGISDLD  240
DVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPTPFPLRL KRPWPTGLPS  300
LHGGKDDDLT SSLMWLRDSA NPGFQSLNFG GAGMNPWMQP RLDASLLGLQ PDIYQTMAAA  360
AFQDPTKMSP TMLQFQQPQN MVGRATPLLQ SQILQQMQPQ FQQQSYLQNM NGTTIQGQAQ  420
SEFLQQQLQR CQSFNEQKPQ LLQQQESNQQ QSQGMQVPQH QHMQQQKNMA NYQSAYSQLS  480
PGPQSSPTAL QTALPFSQSQ SFSDTNMSSL SPSGAPAMHN TLGPFSSETA SHLSMSRPTA  540
VPVPDSWSSK RVAVESLIPS RPQSTTHMEQ LSSTPPSIPQ SSALAPLPGR GCLVDQDGSS  600
DPQNHLLFGV NIDSHSLLMQ GGLHDENDST AIPYSTSNFL SPSQHDFSLD QTLNSSGCLD  660
ESGYVPCSHT PDQVNQPPAT FVKVYKSGTY GRSLDITKFS NYHELRRELG RLFGLEGQLE  720
DPMRSGWQLV FVDREEDVLL VGDDPWQEFV NSVSCIKILS PQEVQQMGKQ GLELLSSAPG  780
KRLGGGGGGS SCDDYASRQE SRSLSTGIAS VGSVEVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein