PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG063770.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 410aa MW: 44673.8 Da PI: 7.9013

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG063770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed l+d v+++G g+W+++ r+ g+ R++k+c++rw ++l TRIDC7AG063770.1 31 KGPWTQAEDRVLLDHVRRHGEGNWNAVRRETGLQRCGKSCRLRWANHL 78 79******************************************9986 PP
2	Myb_DNA-binding	47	5.9e-15	84	127	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ l+++++ + G++ W++I+ +++ gRt++++k++w++ TRIDC7AG063770.1 84 KGPFSPEEERLILRLHGLIGNK-WARISTHLP-GRTDNEVKNFWNT 127 79******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
RRRSADMATA MDTTVPRSGV GEGGGGGGLK KGPWTQAEDR VLLDHVRRHG EGNWNAVRRE 60 TGLQRCGKSC RLRWANHLRP NLRKGPFSPE EERLILRLHG LIGNKWARIS THLPGRTDNE 120 VKNFWNTRLK RRQRAGQSLY PPDVEREIAL MRAQNINPFA DADGNTAASP FSDPFALPPR 180 PPSSTKPPSH SHSSPLIDQH HPLLNQMQGM QMRHHAAQHQ HPQPAFHHHH HHHHGGMRAA 240 GLPPLPATAA RPRELPSNQI ETASCSGGGD GLLEALLLGV DDHQLPRPNH GVCRAGSMPD 300 LMYGGVSSAS DSDDTSQFPP GGQDAHHGGK WDFLIDDVKP PMRRATSAAE NETSGMFGVA 360 HGSISGEWFG TGVGSPGPSS VVTTDDEFGL EMQQLMSSLP LSADELNWNA

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

RRRSADMATA MDTTVPRSGV GEGGGGGGLK KGPWTQAEDR VLLDHVRRHG EGNWNAVRRE  60
TGLQRCGKSC RLRWANHLRP NLRKGPFSPE EERLILRLHG LIGNKWARIS THLPGRTDNE  120
VKNFWNTRLK RRQRAGQSLY PPDVEREIAL MRAQNINPFA DADGNTAASP FSDPFALPPR  180
PPSSTKPPSH SHSSPLIDQH HPLLNQMQGM QMRHHAAQHQ HPQPAFHHHH HHHHGGMRAA  240
GLPPLPATAA RPRELPSNQI ETASCSGGGD GLLEALLLGV DDHQLPRPNH GVCRAGSMPD  300
LMYGGVSSAS DSDDTSQFPP GGQDAHHGGK WDFLIDDVKP PMRRATSAAE NETSGMFGVA  360
HGSISGEWFG TGVGSPGPSS VVTTDDEFGL EMQQLMSSLP LSADELNWNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	8e-57	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG063770.1