PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG058890.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 176aa MW: 19119.2 Da PI: 10.3455 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53.3 | 3.8e-17 | 71 | 107 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cgt Tp++Rrgp+g++tLCnaCGl+++ kg+ TRIDC7AG058890.7 71 CHHCGTNAhnTPMMRRGPEGPRTLCNACGLMWANKGM 107 ******9999***********************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MRFREKRKER NFDKKIRYTV RKEVALRMQR NRGQFTSSKP KPDDGTSELA TADGSPNWGS 60 VEGRPPSAAS CHHCGTNAHN TPMMRRGPEG PRTLCNACGL MWANKGMLRD LSKSTPPSLQ 120 MVSTGPNDSQ NGNTLSQQNG STLSQQNGNA AIVPFAEQQN PAPATDANGH DHGSST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 2e-49 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG058890.7 |