PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG058890.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 261aa MW: 27777.1 Da PI: 10.0521 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 52.4 | 7e-17 | 156 | 192 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cgt Tp++Rrgp+g++tLCnaCGl+++ kg+ TRIDC7AG058890.4 156 CHHCGTNAhnTPMMRRGPEGPRTLCNACGLMWANKGM 192 ******9999***********************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
AAAAGAPLDP HGAMVSAIVP PTTGNQLTLS FQGEVYVFDS VSPDKVQAVL LLLGGRELNP 60 GMGAGASSST PYSKRLNFPH RVASLMRFRE KRKERNFDKK IRYTVRKEVA LRMQRNRGQF 120 TSSKPKPDDG TSELATADGS PNWGSVEGRP PSAASCHHCG TNAHNTPMMR RGPEGPRTLC 180 NACGLMWANK GMLRDLSKST PPSLQMVSTG PNDSQNGNTL SQQNGSTLSQ QNGNAAIVPF 240 AEQQNPAPAT DANGHDHGSS T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 1e-76 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG058890.4 |