PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG058890.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 393aa    MW: 41595.4 Da    PI: 4.4681
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG058890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.61.2e-16280316135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cgt    Tp++Rrgp+g++tLCnaCGl+++ kg+
  TRIDC7AG058890.1 280 CHHCGTNAhnTPMMRRGPEGPRTLCNACGLMWANKGM 316
                       ******9999***********************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MAQHDGKPYQ PRRGPERPPQ PAEDPPAPAA APAAADAVID HLAAVAAEAE ALNASIAAVA  60
AEAEAMNAYE HAQEQEMEEE EEEEEEEEEE EMEEDDDDGE GDGQHGGNGE SVPIDAEAAA  120
QAAAAAAAGA PLDPHGAMVS AIVPPTTGNQ LTLSFQGEVY VFDSVSPDKV QAVLLLLGGR  180
ELNPGMGAGA SSSTPYSKRL NFPHRVASLM RFREKRKERN FDKKIRYTVR KEVALRMQRN  240
RGQFTSSKPK PDDGTSELAT ADGSPNWGSV EGRPPSAASC HHCGTNAHNT PMMRRGPEGP  300
RTLCNACGLM WANKGMLRDL SKSTPPSLQM VSTGPNDSDD LNSHAQQNGN TLSQQNGSTL  360
SQQNGNAAIV PFAEQQNPAP ATDANGHDHG SST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.27e-75GATA family protein