PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG057990.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 381aa MW: 41882.8 Da PI: 8.481

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG057990.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.9	1.1e-28	274	325	1	52
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 k rlrWt eLHerFveav++L G++kAtPk +l+lmkv+gLt++hvkSHLQ+ TRIDC7AG057990.4 274 KSRLRWTLELHERFVEAVNKLEGPDKATPKGVLKLMKVEGLTIYHVKSHLQR 325 68*************************************************6 PP
2	Myb_DNA-binding	49.7	8.2e-16	276	324	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT e++e++v+av++l g+ t+k + + m +g+t +++ks++q TRIDC7AG057990.4 276 RLRWTLELHERFVEAVNKLEGPdkaTPKGVLKLMKvEGLTIYHVKSHLQ 324 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MSSHGVVAVK PIATPDKTTH SYACGSTQSS VHKLLDSKLD HLGLLDDNLS STSQSSDIKT 60 ELIRTSSLGR SSLPFNLQRR SPEPDPESPL SHVSHPNFSE PMASNSSTFC TSLFSSSSTN 120 SAPCRRMGAL PFLPHPPKYE QQVLPGQSST SSLQLSGDTG NVHDEAEQAD DIKDFLNLSA 180 GDASDGSFHG ENQAFAFAEA EQMEFQFLSE QLGIAITDNE ESPQLDDIYD TPPPQMSSLP 240 VSSCSNQILQ NPGSPAKLPL SSSRSSSGSA AANKSRLRWT LELHERFVEA VNKLEGPDKA 300 TPKGVLKLMK VEGLTIYHVK SHLQRSTDTQ SIFQRSKKKR RLPRTLRKYN RVAVEAIRSK 360 TRTWQKLYGC KWRFRSSSMN S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MSSHGVVAVK PIATPDKTTH SYACGSTQSS VHKLLDSKLD HLGLLDDNLS STSQSSDIKT  60
ELIRTSSLGR SSLPFNLQRR SPEPDPESPL SHVSHPNFSE PMASNSSTFC TSLFSSSSTN  120
SAPCRRMGAL PFLPHPPKYE QQVLPGQSST SSLQLSGDTG NVHDEAEQAD DIKDFLNLSA  180
GDASDGSFHG ENQAFAFAEA EQMEFQFLSE QLGIAITDNE ESPQLDDIYD TPPPQMSSLP  240
VSSCSNQILQ NPGSPAKLPL SSSRSSSGSA AANKSRLRWT LELHERFVEA VNKLEGPDKA  300
TPKGVLKLMK VEGLTIYHVK SHLQRSTDTQ SIFQRSKKKR RLPRTLRKYN RVAVEAIRSK  360
TRTWQKLYGC KWRFRSSSMN S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	341	KKKRR
2	337	342	KKKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-34	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG057990.4