PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG057850.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 390aa    MW: 42524.8 Da    PI: 9.0482
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG057850.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.58.3e-12527326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                       elCr+++r G CkyG++C+F H+
  TRIDC7AG057850.2  5 PELCRNYQR-GSCKYGAQCRFVHS 27
                      69*******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MNRRPELCRN YQRGSCKYGA QCRFVHSNSN QQQQQQAKPN PFGFGAGGRQ QPQQQSFGAQ  60
SQQQQQQQQK PNPFGFGVQG GAAQQRNEPG PAKPFQNKWV RDPSAPPTKQ AEAQPAPQAA  120
HTSCADTESC RQQISDDFKN EAPLWKLTCY AHLRSGPCDI MGDISYEELR AKAYEEGKQG  180
KPMQSIVEGE RNLQNAKLAE FTNLLNKARA TPSFPTAGSF PEVKNNSTFG SSQTNGPPVF  240
SSFNQLGAAT NFGSGPRTAT PGVPMNTIFG QPTQSTPSFG APAFGSTGMR FGVPVGSQTS  300
KQSFGSYQGS SMSSNSNFQN STSSGHHRDI DKQSVELLNG MTPRTSAMDQ AAVEASRNEK  360
QDDSIWLKEK WEIGQIPLDE PPARHVSHVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.12e-42C3H family protein