PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG056000.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 269aa MW: 28183 Da PI: 10.6298 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 24.2 | 6e-08 | 71 | 96 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+lC+ f Ck G++C+FaHg+ TRIDC7AG056000.2 71 KTRLCNKFNTAEGCKWGNKCHFAHGE 96 9***********************96 PP | |||||||
2 | zf-CCCH | 37.6 | 3.6e-12 | 235 | 260 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +kt+lC++f + G C +GdrC+FaHg+ TRIDC7AG056000.2 235 FKTKLCDNFNK-GSCTFGDRCHFAHGE 260 69*********.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
GGHQRRRRRQ ARQSTAGCPF GSSCHFLHNF PGGHQAVSKM TNLGGPAVSA PQGRMPMGPG 60 VPDGPPTPSL KTRLCNKFNT AEGCKWGNKC HFAHGERELG KPMLLNNSMA PPMGPRPNGH 120 FQPSPMPGPD MVPPSTFGAS ATAKISVDAS LAGAIIGKGG VNTKHISRMT GAKLAIRDNE 180 ADPNHKNIEL EGSFDQVNHA SAMVKELILR IGGNAPPQAK NPGRGPAGGG GGSNFKTKLC 240 DNFNKGSCTF GDRCHFAHGE SELRKSAAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06770.1 | 1e-54 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG056000.2 |