PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG052530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 104aa MW: 11919.5 Da PI: 7.8793 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 38.1 | 4.9e-12 | 17 | 96 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e GF +r ks+ + ++ +C +e r +k+ +++ + r++C a +++ + +d+ w++++ + HnH+l+ TRIDC7AG052530.1 17 DFYNLYSWEKGFGIRYVKSRLN-------VSRTKCMQEIVRGCVDKA---GVENTRSCRCECPALIRLLRAEDDGWYIAEHRGSHNHSLS 96 6**************9998877.......45669*********9988...999999*******************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MVPKIGTSFD TLGEAYDFYN LYSWEKGFGI RYVKSRLNVS RTKCMQEIVR GCVDKAGVEN 60 TRSCRCECPA LIRLLRAEDD GWYIAEHRGS HNHSLSLNFG ETIH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 3e-11 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG052530.1 |