PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG052210.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 219aa MW: 24387.7 Da PI: 4.5524 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.1 | 3.4e-09 | 151 | 198 | 6 | 53 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k qle+Le+++ k++ p+ +++ + + ++L+ + + WF rR TRIDC7AG052210.4 151 RLKKAQLETLEKVYFKSKRPTNTMISSIVQVTSLPRKTIIKWFEDRRE 198 6789******************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MARFEQVLAE AIGDVDVADE SAVDLVSGSE VAGNDEAADP VEPPELKSWQ LRRLARAMQI 60 GRRKTSIKNL AGELGLDRGL VIELLRNPPP ELLLMSDSLP DEAPSKPETK EIEPSPVADE 120 VVVDEIDATE ANPQMDLPVH IMSTEWSAQK RLKKAQLETL EKVYFKSKRP TNTMISSIVQ 180 VTSLPRKTII KWFEDRREQD GVPDRRAAYM RSLSETVAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 2e-52 | HB-other family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG052210.4 |