PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG051770.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 464aa MW: 52938.2 Da PI: 7.5736

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG051770.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.1	3e-23	74	166	2	90
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYn+YA +GF +r+++s+++ k ++ ++++fvC keg+++++k+ ++k++r+r + r gC a+++v ++ +kw++tkl+leH+H + TRIDC7AG051770.13 74 FYNAYALGLGFGIRVARSRSErrKGTEVLVMKRFVCMKEGHHKKKKDVdsSNKKKRKRLSIREGCPAMMEVVRRGPEKWVITKLVLEHTHVI 165 9***********99988874355667899*****9999887666899999********************************87 PP FAR1 90 a 90 + TRIDC7AG051770.13 166 V 166 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
DLVEDFMDVE DDTGTTDVDQ GTSVMSSQIH CIDPSEGSMS TAVNELLPAA DELGKNAEPY 60 LGMEFTSDAA ARAFYNAYAL GLGFGIRVAR SRSERRKGTE VLVMKRFVCM KEGHHKKKKD 120 VDSSNKKKRK RLSIREGCPA MMEVVRRGPE KWVITKLVLE HTHVIVSPDK VREVQLLRLS 180 GKEHADQLQE ARRNVFGDTG ASGLFTYLMR RQSENSGFFY NVQVDGRNCL RNAVWVDARS 240 KMSYKYFGDA VYFDTTYTQN VNMLPFAAFT GMNHHELSLT RRAETISGFY RNNFSTRAPL 300 LSFITTFDQH IDRLYMNEAQ KDLALFPPEQ LLKTNSILEK QAASIYTRAA FEFFQTELIE 360 SLHHYAVKVE ESPYEAKYYV ERDGDPPTRH TVVYNVAEKK AWCDCCRFAF SAILCRHVLG 420 VFILADIDMI PEPCITKRWT KKAKTGPVFV GRILEDENRH TDSV

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

DLVEDFMDVE DDTGTTDVDQ GTSVMSSQIH CIDPSEGSMS TAVNELLPAA DELGKNAEPY  60
LGMEFTSDAA ARAFYNAYAL GLGFGIRVAR SRSERRKGTE VLVMKRFVCM KEGHHKKKKD  120
VDSSNKKKRK RLSIREGCPA MMEVVRRGPE KWVITKLVLE HTHVIVSPDK VREVQLLRLS  180
GKEHADQLQE ARRNVFGDTG ASGLFTYLMR RQSENSGFFY NVQVDGRNCL RNAVWVDARS  240
KMSYKYFGDA VYFDTTYTQN VNMLPFAAFT GMNHHELSLT RRAETISGFY RNNFSTRAPL  300
LSFITTFDQH IDRLYMNEAQ KDLALFPPEQ LLKTNSILEK QAASIYTRAA FEFFQTELIE  360
SLHHYAVKVE ESPYEAKYYV ERDGDPPTRH TVVYNVAEKK AWCDCCRFAF SAILCRHVLG  420
VFILADIDMI PEPCITKRWT KKAKTGPVFV GRILEDENRH TDSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	131	KKKKDVDSSNKKKRKR
2	117	132	KKKKDVDSSNKKKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-29	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG051770.13