PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG042540.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 244aa    MW: 26250.8 Da    PI: 9.3325
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG042540.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.77.4e-15347347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+  ++ + ++lG+g+W+ Ia+ + ++Rt+ q+ s+ qky
  TRIDC7AG042540.4  3 PWTEEEHRTFLAGLEKLGKGDWRGIAKNFVTTRTPTQVASHAQKY 47
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
AVPWTEEEHR TFLAGLEKLG KGDWRGIAKN FVTTRTPTQV ASHAQKYFLR QTNPNKKKRR  60
SSLFDMMASD LSPAPNCPIL PPTMAKFHDM VTMTNQLQNS SLEGVSSSNA ANLAKQVTRD  120
LPPPVPSFTA TNVDGSLSKM NHMDCFSRVP SLFRPIPIVP EGTPPSAPAT ANTSALTFEA  180
NLTSCTSAFL IPQSGPSPLP PATAAKTDHA AENKDLELTV GLPSQQNMTN NISSRNAVGV  240
IQVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15660KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.12e-35MYB_related family protein