PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG041840.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 182aa MW: 19461.9 Da PI: 9.7299 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 38 | 79 | 2 | 40 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 g WT +E ell + +++ g +W++Ia+ +g +Rt++++ TRIDC7AG041840.3 38 GEWTDQEMELLRRQMLKHPAGepqRWEKIAAVFGGRRTPESV 79 78********************************99999987 PP | |||||||
2 | Myb_DNA-binding | 21.9 | 4e-07 | 125 | 168 | 2 | 43 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 g W++ Ed l++a k+++++ +W+++a+ ++ g+t c r TRIDC7AG041840.3 125 GGWSAGEDRSLLNALKEFPKDtamRWEKVAAAVP-GKTKAGCMKR 168 56********************************.***9888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
PKSSDPVAPP VQPPPLRQEA MGAGTAVLDG GEREEEVGEW TDQEMELLRR QMLKHPAGEP 60 QRWEKIAAVF GGRRTPESVI RAAKSGGATA AGGSFEQFLR KRKPLDPRAG AADADTGGNA 120 GGGDGGWSAG EDRSLLNALK EFPKDTAMRW EKVAAAVPGK TKAGCMKRVT ELKRDFRSSK 180 EP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 104 | LRKRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45420.1 | 4e-41 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG041840.3 |