PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7AG041760.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 634aa MW: 70246.8 Da PI: 4.4827

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG041760.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.3e-52	9	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lp GfrFhPtdeelv +yLk k++g+ ++ evi+e+d++k+ePwdLp k +++e+ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+ TRIDC7AG041760.3 9 LPLGFRFHPTDEELVRHYLKGKITGQIKNEVEVIPEIDVCKCEPWDLPdKaLIRSEDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRV 101 699*********************988889***********96336677888******************************* PP NAM 92 vlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++sk k++ +g+kktLvf++grapkge+t W+mheyr TRIDC7AG041760.3 102 IKSKgekkKQHMIGMKKTLVFHRGRAPKGERTGWIMHEYRT 142 976555556**************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MTVMELKALP LGFRFHPTDE ELVRHYLKGK ITGQIKNEVE VIPEIDVCKC EPWDLPDKAL 60 IRSEDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIKSKGEKKK QHMIGMKKTL 120 VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FQKQLEKTER SIPEEMDRSG 180 YSPTPSRSTP DNMEANEEAI TLINKESPES GLHGCPIELP GTIDTPGTPV TRWLADRNGN 240 SGIDEANVLG MPFHGNVDES PKLSHIMKQA DMSVGSLAHL IDSQTENLGS HEFATVSAPM 300 LSHEDLDKLL LQLPHNSVED FLNETIADPD EHSSTAYKVQ YDADTCFMQV IIILASAAQG 360 ELLYDGPNWF GNFLSDDTNP QQSGLYENAA LLPYGTNPDV LSMDSGDESL QDLFNSMDDS 420 SGQNDVWSNG FGFNPMHQQL QSTVHPNYIF SQQGIAPRRL RLLDSLSDVN VESRECMTRD 480 EHEGEESDIV TSKCTSESVE SSADVDDSES TGVTIMTRRR ALTRSVPSDC DDAQSTGITI 540 MARRPAPSSN MPSDEADAEA TGIDIMSRHT APSSSTDSSF NTEQGTAVRR LRLQLNLDAG 600 SCSSVDGSSS CIIEHGSENE GLEAEVRTSF LLLT

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MTVMELKALP LGFRFHPTDE ELVRHYLKGK ITGQIKNEVE VIPEIDVCKC EPWDLPDKAL  60
IRSEDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIKSKGEKKK QHMIGMKKTL  120
VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FQKQLEKTER SIPEEMDRSG  180
YSPTPSRSTP DNMEANEEAI TLINKESPES GLHGCPIELP GTIDTPGTPV TRWLADRNGN  240
SGIDEANVLG MPFHGNVDES PKLSHIMKQA DMSVGSLAHL IDSQTENLGS HEFATVSAPM  300
LSHEDLDKLL LQLPHNSVED FLNETIADPD EHSSTAYKVQ YDADTCFMQV IIILASAAQG  360
ELLYDGPNWF GNFLSDDTNP QQSGLYENAA LLPYGTNPDV LSMDSGDESL QDLFNSMDDS  420
SGQNDVWSNG FGFNPMHQQL QSTVHPNYIF SQQGIAPRRL RLLDSLSDVN VESRECMTRD  480
EHEGEESDIV TSKCTSESVE SSADVDDSES TGVTIMTRRR ALTRSVPSDC DDAQSTGITI  540
MARRPAPSSN MPSDEADAEA TGIDIMSRHT APSSSTDSSF NTEQGTAVRR LRLQLNLDAG  600
SCSSVDGSSS CIIEHGSENE GLEAEVRTSF LLLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	1e-70	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG041760.3