PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC7AG035560.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SRS

Protein Properties

Length: 143aa MW: 14425 Da PI: 6.385

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG035560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	86.3	7.1e-27	16	74	96	154
DUF702 96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++++ + ++P+evsseavfrcvr++ vd++e+e+aYqt+vsigGhvfkGiL+d G+++ TRIDC7AG035560.1 16 QQQMMAADRFPREVSSEAVFRCVRLGPVDEAEAEVAYQTTVSIGGHVFKGILHDVGPDT 74 577889999***********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
AKPASPPPPP LPLLPQQQMM AADRFPREVS SEAVFRCVRL GPVDEAEAEV AYQTTVSIGG 60 HVFKGILHDV GPDTSITGGT RTGHHAVEGS SPSTAAAGGA EGGSGSTGAA AVSSSAVVMD 120 PYPTPGPYGA YGGAPFFHGH HPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18120.1	5e-19	SRS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG035560.1