PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG030090.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 359aa MW: 39549.3 Da PI: 8.0992

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG030090.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25	3.3e-08	13	75	6	56
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 +ft+ ++ e+ee+ + n p+++ ++ LA+k ++ +qV +WFqNrR+ ++ TRIDC7AG030090.2 13 RFTHAEVAEMEEHLRHlnNAIPQRNVIQGLAEKFtasaaragkiPVQYKQVWNWFQNRRYSQR 75 69999*****999554999*****************99999***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGRPPSSGGP AFRFTHAEVA EMEEHLRHLN NAIPQRNVIQ GLAEKFTASA ARAGKIPVQY 60 KQVWNWFQNR RYSQRARTPR GAPPPQGKML PTGAEEHHPA SFRAQGSSSS YPGSHSGKSA 120 SDGGQAEFEA KSARDGAWYD VAAFLSHRLF ETGDPEVKVR FSGFGPEEDE WINVRKCVRL 180 RSLPCESAEC VAVLPGDLIL CFQEGKEQAL YFDARVLDAQ RRRHDVRGCR CRFLVRYDHD 240 HSEEIVPLRK VCRRPETDFR LQILHASRAA ASADAQNVSP VEQKPQKAHK MMDVNTAEVT 300 VVRNPDQGGP SDKPAAPLPA AAAGTRGDSV SDVQMGNVEV IPKVEAANEA HDDKMNVGA

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGRPPSSGGP AFRFTHAEVA EMEEHLRHLN NAIPQRNVIQ GLAEKFTASA ARAGKIPVQY  60
KQVWNWFQNR RYSQRARTPR GAPPPQGKML PTGAEEHHPA SFRAQGSSSS YPGSHSGKSA  120
SDGGQAEFEA KSARDGAWYD VAAFLSHRLF ETGDPEVKVR FSGFGPEEDE WINVRKCVRL  180
RSLPCESAEC VAVLPGDLIL CFQEGKEQAL YFDARVLDAQ RRRHDVRGCR CRFLVRYDHD  240
HSEEIVPLRK VCRRPETDFR LQILHASRAA ASADAQNVSP VEQKPQKAHK MMDVNTAEVT  300
VVRNPDQGGP SDKPAAPLPA AAAGTRGDSV SDVQMGNVEV IPKVEAANEA HDDKMNVGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-102	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG030090.2