PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG028240.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 793aa MW: 84706.9 Da PI: 5.5858

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG028240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00063	198	219	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp Cgk F++ ++ H+r+H TRIDC7AG028240.1 198 PCPECGKLFRNDKSMFGHLRSH 219 6*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence
MSKRSGLLCV LLLSLVLLLQ AASLCLPAAA GSNRQLVVAA AAARIGDKFL CQDPIGRPSS 60 SSVMSSNAGD ELSSPPAAAF TQEGFTAPAA AFNQEGFTAP AAAFTQQGFT APADAFTQEG 120 FLGDEAFSSG DRYPKEDEDE LLSGDGYSRD PDRSVEEEGP LGEEEEDGDD LMLIVKQGAQ 180 VEPSSNNYEL HGSSADVPCP ECGKLFRNDK SMFGHLRSHP NRGYKKGSGH LKSRPSKGYK 240 PPARPKPLPS RNGKLSPLPS SSAKLSQLPS RNGNLSPLLS RNGNLSPPAN DSSRVARYSQ 300 RDPELSRFEV MMAYVMLTLK QRGDGVAQDQ SHKRKRESSE LDVPEEDLVR NKAGDGVVLG 360 DRHGTSVAEM LGDDVVHRSE QGSSLVEMAV DDAVLGDKHG TSVAEMPGDD AVHRSEQGSS 420 LVEMAVHDVV LGDKHGTSVA EMAGNDVVLG DKNSTSVAEM AGNDVVLSDK HGTSVAEMPG 480 DDAVYRSEQG SSLAEMAGAD VVLPNEHHGS VAVMAEDDVV HRSEQGSSLA EMAGVDVVLG 540 DKHGTSVAEM PGDDAVHHSE QGSSLAEMAG DDVMLPNEHH GSVAVMAGDA VVRNEHGNVE 600 VPRKKGRKKS KESTEARRKE KVPSASMVKR SYTCKQCKAE FPTHQALGGH MAAHNKDKRI 660 QAQNEQAAAA WEAHQHQIDR SLNRLVTSSM KPAWEAHQSQ KGQNPNRQGT KGGGEEPRQG 720 GGMFMSTREL LMERYTKLFN QGWLSRQEAG GSSKRQHTEK EDGGSSSVAP PLADGGRRRP 780 FDIDLNAMAP EKE

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence

MSKRSGLLCV LLLSLVLLLQ AASLCLPAAA GSNRQLVVAA AAARIGDKFL CQDPIGRPSS  60
SSVMSSNAGD ELSSPPAAAF TQEGFTAPAA AFNQEGFTAP AAAFTQQGFT APADAFTQEG  120
FLGDEAFSSG DRYPKEDEDE LLSGDGYSRD PDRSVEEEGP LGEEEEDGDD LMLIVKQGAQ  180
VEPSSNNYEL HGSSADVPCP ECGKLFRNDK SMFGHLRSHP NRGYKKGSGH LKSRPSKGYK  240
PPARPKPLPS RNGKLSPLPS SSAKLSQLPS RNGNLSPLLS RNGNLSPPAN DSSRVARYSQ  300
RDPELSRFEV MMAYVMLTLK QRGDGVAQDQ SHKRKRESSE LDVPEEDLVR NKAGDGVVLG  360
DRHGTSVAEM LGDDVVHRSE QGSSLVEMAV DDAVLGDKHG TSVAEMPGDD AVHRSEQGSS  420
LVEMAVHDVV LGDKHGTSVA EMAGNDVVLG DKNSTSVAEM AGNDVVLSDK HGTSVAEMPG  480
DDAVYRSEQG SSLAEMAGAD VVLPNEHHGS VAVMAEDDVV HRSEQGSSLA EMAGVDVVLG  540
DKHGTSVAEM PGDDAVHHSE QGSSLAEMAG DDVMLPNEHH GSVAVMAGDA VVRNEHGNVE  600
VPRKKGRKKS KESTEARRKE KVPSASMVKR SYTCKQCKAE FPTHQALGGH MAAHNKDKRI  660
QAQNEQAAAA WEAHQHQIDR SLNRLVTSSM KPAWEAHQSQ KGQNPNRQGT KGGGEEPRQG  720
GGMFMSTREL LMERYTKLFN QGWLSRQEAG GSSKRQHTEK EDGGSSSVAP PLADGGRRRP  780
FDIDLNAMAP EKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	603	619	RKKGRKKSKESTEARRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37740.1	3e-06	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG028240.1