PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG028170.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 192aa    MW: 22948.2 Da    PI: 8.4858
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG028170.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding223.7e-0743105147
                       TSSS-HHHHHHHHHHHHH.TTTT..................-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkq.lGgg..................tWktIartmgkgRtlkqcksrwqky 47 
                       +grWT++E++ l d+v++ l  +                  +W++I+ ++  +R  k+c ++w+  
  TRIDC7AG028170.5  43 KGRWTQDEHQNLFDLVNLdL--RlkahqiknpdhrllrdniSWEAISDKLT-TRNHKNCCLKWYET 105
                       79**************8532..3346689999******************9.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
KEQIRRFVES NGTDWKTLAR ELGKSEIHVK DTWRRIKPKN LKKGRWTQDE HQNLFDLVNL  60
DLRLKAHQIK NPDHRLLRDN ISWEAISDKL TTRNHKNCCL KWYETLASPM VKEGVWADVD  120
DYLLVEALQK VDAVCIEDVD WDSLLDHRSG EVCRQRWNQM VRAIGGHREK PFIEQVEVLS  180
RRYCPEMIEY RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.12e-75MYB_related family protein