PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG026690.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 490aa MW: 53613.7 Da PI: 6.9514

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG026690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27	8.2e-09	324	372	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq TRIDC7AG026690.1 324 NSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSLQ 372 58***********************9....566***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
RLTGFPFKRC IPVRLLDLWR RGLRSEAAPN LKLTFCWHRR FRSSRSDRSE METNEKNAAD 60 LEDKNQPSGH GQQPSFHGPG FSLSPEAQMD SSSSALAAMG NPFPPGLWNP PGQNFGLGET 120 NTNAMLNGHQ FSSFLGMLSA ATPAYPGAQS GFMDCGAGFP GLSANSLGAM MDHPFSRNPA 180 MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKELSKP ECSGGAGQDE 240 GPSVSCPKKR KRPSQDRGVK HVQEGSQQLA TLAAKQEKDD DDKDEPKRPV GTSRKSNGKQ 300 TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG CSKVIGKAVM 360 LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD LFQSQGTASS TFGFLPDIGH 420 QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP VGCTFKEATH QVPNNFDGEF HNVIGMPFTL 480 FNDHESNDKP

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

RLTGFPFKRC IPVRLLDLWR RGLRSEAAPN LKLTFCWHRR FRSSRSDRSE METNEKNAAD  60
LEDKNQPSGH GQQPSFHGPG FSLSPEAQMD SSSSALAAMG NPFPPGLWNP PGQNFGLGET  120
NTNAMLNGHQ FSSFLGMLSA ATPAYPGAQS GFMDCGAGFP GLSANSLGAM MDHPFSRNPA  180
MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKELSKP ECSGGAGQDE  240
GPSVSCPKKR KRPSQDRGVK HVQEGSQQLA TLAAKQEKDD DDKDEPKRPV GTSRKSNGKQ  300
TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG CSKVIGKAVM  360
LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD LFQSQGTASS TFGFLPDIGH  420
QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP VGCTFKEATH QVPNNFDGEF HNVIGMPFTL  480
FNDHESNDKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	253	PKKRKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-64	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG026690.1