PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG024270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 349aa MW: 39224.8 Da PI: 6.9667

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG024270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.6e-52	16	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+GfrFhPtd e++++yL +kv +k++++ +vi+evd++k+ePwdL+++v+ +ek+ yfFsk+d ky+tg r+nrat++gyWkatgkdke++ TRIDC7AG024270.1 16 LPAGFRFHPTDMEIITFYLVRKVLKKPFDV-TVIEEVDLNKCEPWDLRNNVNMGEKDQYFFSKKDLKYPTGVRTNRATNAGYWKATGKDKEIV 107 799*************************.99***********99999************************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +l+g+kktLvfykgrap+gekt+W+mheyrle TRIDC7AG024270.1 108 HPpTMSLIGMKKTLVFYKGRAPRGEKTNWIMHEYRLE 144 978889***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAVHLQVQQQ QQHLNLPAGF RFHPTDMEII TFYLVRKVLK KPFDVTVIEE VDLNKCEPWD 60 LRNNVNMGEK DQYFFSKKDL KYPTGVRTNR ATNAGYWKAT GKDKEIVHPP TMSLIGMKKT 120 LVFYKGRAPR GEKTNWIMHE YRLEMGKQHT PDLPTDIVRA ASINASSKEE YVICRIFHKS 180 TGLRKVVMPS YSMPIPNSMG VEQQQGFLES NTLAPLMDYD VPSSLAPLSP LPAASLYQMH 240 NFGAESSIMG SAVLPMMNNQ YFENHHHQMM VAPPQSSMSV YNNQQQQMMH MSAEQGFMVG 300 VDPGSGTSSI VSDEDVLTGT SNNIQGNGVA TISSEISSVN MGMDGMWNY

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAVHLQVQQQ QQHLNLPAGF RFHPTDMEII TFYLVRKVLK KPFDVTVIEE VDLNKCEPWD  60
LRNNVNMGEK DQYFFSKKDL KYPTGVRTNR ATNAGYWKAT GKDKEIVHPP TMSLIGMKKT  120
LVFYKGRAPR GEKTNWIMHE YRLEMGKQHT PDLPTDIVRA ASINASSKEE YVICRIFHKS  180
TGLRKVVMPS YSMPIPNSMG VEQQQGFLES NTLAPLMDYD VPSSLAPLSP LPAASLYQMH  240
NFGAESSIMG SAVLPMMNNQ YFENHHHQMM VAPPQSSMSV YNNQQQQMMH MSAEQGFMVG  300
VDPGSGTSSI VSDEDVLTGT SNNIQGNGVA TISSEISSVN MGMDGMWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-69	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG024270.1