PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG023550.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 349aa MW: 39217.2 Da PI: 9.4182

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG023550.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.4	3.4e-50	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Ptd e++++yL +kv +k +++ +v+kevd++k+ePwdL +kv+ +ek yfFs++ ky+tg r+nratk+gyWkatgkdke++ TRIDC7AG023550.1 16 LPPGFRFQPTDMEIITFYLVPKVLKKVFDT-TVVKEVDLNKCEPWDLLNKVNMGEKGRYFFSQKGLKYSTGIRTNRATKAGYWKATGKDKEII 107 79************************99.99**********999999************************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + +g+kktLvfykgrapkgekt+W+mheyrl TRIDC7AG023550.1 108 HPpTMSIIGMKKTLVFYKGRAPKGEKTNWIMHEYRL 143 978888**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MADHLQVQHH QQQLNLPPGF RFQPTDMEII TFYLVPKVLK KVFDTTVVKE VDLNKCEPWD 60 LLNKVNMGEK GRYFFSQKGL KYSTGIRTNR ATKAGYWKAT GKDKEIIHPP TMSIIGMKKT 120 LVFYKGRAPK GEKTNWIMHE YRLKSGKQPT PGLPADIAKA TTINASSKGE YVVCRIFHKS 180 TGLKKVMMPS SDMSIPMSMG EEKQQSFLKS STLIPLMDYD MLSSLAPPPP LPETSLYQMH 240 TFEAGSFAMG RAVLPMMNNH DFGNHYQQMM ASPQSSMSSY NHHQQQQMME MSVDQGFMVG 300 VDPGYGSSSI VSHEDVVTWL SNNNQGNGGI ATSGEILSMN MGMDGMWKY

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MADHLQVQHH QQQLNLPPGF RFQPTDMEII TFYLVPKVLK KVFDTTVVKE VDLNKCEPWD  60
LLNKVNMGEK GRYFFSQKGL KYSTGIRTNR ATKAGYWKAT GKDKEIIHPP TMSIIGMKKT  120
LVFYKGRAPK GEKTNWIMHE YRLKSGKQPT PGLPADIAKA TTINASSKGE YVVCRIFHKS  180
TGLKKVMMPS SDMSIPMSMG EEKQQSFLKS STLIPLMDYD MLSSLAPPPP LPETSLYQMH  240
TFEAGSFAMG RAVLPMMNNH DFGNHYQQMM ASPQSSMSSY NHHQQQQMME MSVDQGFMVG  300
VDPGYGSSSI VSHEDVVTWL SNNNQGNGGI ATSGEILSMN MGMDGMWKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-65	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG023550.1