PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG023400.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 202aa MW: 23033.2 Da PI: 5.2239

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG023400.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.5	5.4e-28	78	127	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++e +s+yF++pi++AA+eL+v+lTvLK++CR++GI+RWPhRk+ksl TRIDC7AG023400.5 78 RVLTFELVSQYFYMPITQAARELNVGLTVLKKRCRELGIPRWPHRKLKSL 127 6699********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
CAEQQSLQSS HAAPCLVPCD TDELDTSFDD DLLRCWEAIE QSDDSTEESG KGLPLLCYGE 60 VNGAASNAMR ADRVRSERVL TFELVSQYFY MPITQAAREL NVGLTVLKKR CRELGIPRWP 120 HRKLKSLQTL INDVEVLQEA GKANDDGQLR AMVEMLEQER RLLEQRPYVE LEEKTKRLRQ 180 ACFKASYKKR RLLALEPGEA SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	2e-39	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG023400.5