PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG023400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 136aa MW: 16126.8 Da PI: 10.2537 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 89.6 | 2.5e-28 | 10 | 59 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++e +s+yF++pi++AA+eL+v+lTvLK++CR++GI+RWPhRk+ksl TRIDC7AG023400.1 10 RVLTFELVSQYFYMPITQAARELNVGLTVLKKRCRELGIPRWPHRKLKSL 59 6699********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
MRADRVRSER VLTFELVSQY FYMPITQAAR ELNVGLTVLK KRCRELGIPR WPHRKLKSLQ 60 TLINDVEVLQ EAGKANDDGQ LRAMVEMLEQ ERRLLEQRPY VELEEKTKRL RQACFKASYK 120 KRRLLALEPG EASKYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 6e-40 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG023400.1 |