PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG023190.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 602aa MW: 70212.5 Da PI: 8.7104

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG023190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.6	8.5e-18	79	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r +ks+++ +g+ +++fvC ++gk++e +++ ++r++C+a++++ + +d+ w+++++++ HnH++ TRIDC7AG023190.1 79 DFYNLYSWETGFGIRYAKSRTN-VKGTRCMQEFVCCCSGKPKEANST---------SSRCQCQAMIRLLRIDDDGWYINEFRSSHNHSML 158 6***************9998.66668899******997666.........9****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MTIGLRGWRI DIRLLMTKLD ELQAVFRNRK VAMPDERATS AERVTGLETT LTGFAERKTD 60 TVVTPSVRLT FDSIIEAYDF YNLYSWETGF GIRYAKSRTN VKGTRCMQEF VCCCSGKPKE 120 ANSTSSRCQC QAMIRLLRID DDGWYINEFR SSHNHSMLNT CAEKLQFPSH RHIDKYTREL 180 VSQLRENNVN LSKVYNILAT FFGRVENVPF TKRCLRTLCG KLSREQADDD VQKTTAIFSE 240 LKVQDGEFTY NVQVDVESRI RTLMWTNGRS KKKYHRFGDV VTFDTTYKTN LYDMPFGIFV 300 GMNNHFQSVL YAGVLMRDET VDTFKWIFDE FVKMMGGKRP ITILTDQARA MEVAIEEIYP 360 DATHRWCKWH ILKKAKESLG SNYTKKSDFR AEFHKLVHEM LTIEEFEDGW AALLEKYSLT 420 KNTYLTQIYE TRQKWAKPYF AGKFCARQTS TGRSESANHM LKQYVPPSCS MNLFVKQYNK 480 LQFDREQEEG FQEKRTRLSG AVLKVNTPLE VHASKIYTRK MFEIFGGILY ESGSYDVEEI 540 IPKQKYMVTH VKAEKREKWF KCRYEVNVFD NLGYFSCICG LFEHMGMVCC HSLQVSHECA 600 PA

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MTIGLRGWRI DIRLLMTKLD ELQAVFRNRK VAMPDERATS AERVTGLETT LTGFAERKTD  60
TVVTPSVRLT FDSIIEAYDF YNLYSWETGF GIRYAKSRTN VKGTRCMQEF VCCCSGKPKE  120
ANSTSSRCQC QAMIRLLRID DDGWYINEFR SSHNHSMLNT CAEKLQFPSH RHIDKYTREL  180
VSQLRENNVN LSKVYNILAT FFGRVENVPF TKRCLRTLCG KLSREQADDD VQKTTAIFSE  240
LKVQDGEFTY NVQVDVESRI RTLMWTNGRS KKKYHRFGDV VTFDTTYKTN LYDMPFGIFV  300
GMNNHFQSVL YAGVLMRDET VDTFKWIFDE FVKMMGGKRP ITILTDQARA MEVAIEEIYP  360
DATHRWCKWH ILKKAKESLG SNYTKKSDFR AEFHKLVHEM LTIEEFEDGW AALLEKYSLT  420
KNTYLTQIYE TRQKWAKPYF AGKFCARQTS TGRSESANHM LKQYVPPSCS MNLFVKQYNK  480
LQFDREQEEG FQEKRTRLSG AVLKVNTPLE VHASKIYTRK MFEIFGGILY ESGSYDVEEI  540
IPKQKYMVTH VKAEKREKWF KCRYEVNVFD NLGYFSCICG LFEHMGMVCC HSLQVSHECA  600
PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG023190.1