PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG023170.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 377aa MW: 43821.8 Da PI: 7.3516

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG023170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.3	1.1e-17	47	126	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r +ks+++ +g+ +++fvC ++gk++e +++ ++r++C+a++++ +++++ w+++++++ HnH++ TRIDC7AG023170.1 47 DFYNLYSWETGFGIRYAKSRTN-VKGTRCMQEFVCCCSGKPKEANST---------SSRCQCQAMIRLLRTDHDGWYINEFRSSHNHSML 126 6***************9998.66668899******997666.........9****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MPDERATSAE RVTALETALI GFAERKTDTM VTPSVGLTFD SIIEAYDFYN LYSWETGFGI 60 RYAKSRTNVK GTRCMQEFVC CCSGKPKEAN STSSRCQCQA MIRLLRTDHD GWYINEFRSS 120 HNHSMLNTCA EKLHFPSHRH IEKYTRELVS QLRENNVNLS KVYNILATFF GRVENVPSTK 180 RCLRTLCGKL SREQADDDVQ KTMAIFSELE VQDGEFTYNV HVDDESRIRT LMWTNGRSKK 240 QYHHFSDVVT FDTTYKTNLY DMPFGIFVGV NNHFQSVLYA GVLMRDETVD TFKWIFDEFV 300 KMMGGKRPIT ILTDQARAME VAIEEIYPDA THRWCKWHIL KKAKESMGSN YTKKSDFRAK 360 FHKLVHEMLT IEEFEDG

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MPDERATSAE RVTALETALI GFAERKTDTM VTPSVGLTFD SIIEAYDFYN LYSWETGFGI  60
RYAKSRTNVK GTRCMQEFVC CCSGKPKEAN STSSRCQCQA MIRLLRTDHD GWYINEFRSS  120
HNHSMLNTCA EKLHFPSHRH IEKYTRELVS QLRENNVNLS KVYNILATFF GRVENVPSTK  180
RCLRTLCGKL SREQADDDVQ KTMAIFSELE VQDGEFTYNV HVDDESRIRT LMWTNGRSKK  240
QYHHFSDVVT FDTTYKTNLY DMPFGIFVGV NNHFQSVLYA GVLMRDETVD TFKWIFDEFV  300
KMMGGKRPIT ILTDQARAME VAIEEIYPDA THRWCKWHIL KKAKESMGSN YTKKSDFRAK  360
FHKLVHEMLT IEEFEDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-51	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG023170.1