PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG023130.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 399aa MW: 41426.8 Da PI: 8.7505

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG023130.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.4	2.5e-38	53	231	2	136
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas...nsssg.. 88 ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s + TRIDC7AG023130.2 53 PPKRTTSKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSmlsT---Ipa 142 789******************************************************************999766666666663330...256 PP TCP 89 ............................................kaaksaakskksqksaasalnlakesr..akararare.rtrekmrikn 134 + + s +s + l+++ +s a + +r+ r++++m++++ TRIDC7AG023130.2 143 hlraaglpgsrfgggpradawdrfvglgfggglespastttsssS------PLLLSFHSGSVGLDVSPSSAtaAANTELSRKrRWEQEMQQQQ 229 666777888888888999999999999999999999875433330......444444444444555553331122222255545555555554 PP TCP 135 kl 136 ++ TRIDC7AG023130.2 230 QQ 231 43 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDVTGDAGGG RRPNFPLQLL EKKEEHPCSI SPAAGLGTNG SATGELQVRK AAPPKRTTSK 60 DRHTKVDGRG RRIRMPAICA ARVFQLTREL GHKTDGETIE WLLQQAEPAV IAATGTGTIP 120 ANFTSLNISL RSSGSMLSTI PAHLRAAGLP GSRFGGGPRA DAWDRFVGLG FGGGLESPAS 180 TTTSSSSPLL LSFHSGSVGL DVSPSSATAA ANTELSRKRR WEQEMQQQQQ QHHHHQQQQQ 240 QQYQQQMAGY TQSQMPGTVW MVPTSNAQAA GAAPAGGGES IWTFPQPGSG GGGGSATVYR 300 GVPSGLHFMN IPAPMAVHAQ QLGLGQAGGG GSAAAGEGHM GILAALNAYR GQHAAASEVT 360 VAGHNGAAEG TTHHQHQNQH QHLQHGGGEP NESMSGSDS

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDVTGDAGGG RRPNFPLQLL EKKEEHPCSI SPAAGLGTNG SATGELQVRK AAPPKRTTSK  60
DRHTKVDGRG RRIRMPAICA ARVFQLTREL GHKTDGETIE WLLQQAEPAV IAATGTGTIP  120
ANFTSLNISL RSSGSMLSTI PAHLRAAGLP GSRFGGGPRA DAWDRFVGLG FGGGLESPAS  180
TTTSSSSPLL LSFHSGSVGL DVSPSSATAA ANTELSRKRR WEQEMQQQQQ QHHHHQQQQQ  240
QQYQQQMAGY TQSQMPGTVW MVPTSNAQAA GAAPAGGGES IWTFPQPGSG GGGGSATVYR  300
GVPSGLHFMN IPAPMAVHAQ QLGLGQAGGG GSAAAGEGHM GILAALNAYR GQHAAASEVT  360
VAGHNGAAEG TTHHQHQNQH QHLQHGGGEP NESMSGSDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	3e-50	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG023130.2