PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG022400.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 199aa    MW: 22658.8 Da    PI: 10.2714
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG022400.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.43.8e-191461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WTteEde+l  +++++G g+W++ ++  g++R++k+c++rw +yl
  TRIDC7AG022400.3 14 KGPWTTEEDEKLMSYIQKHGHGSWRSLPQLAGLNRCGKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding59.19.8e-1967112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++++eE++ ++++++ lG++ W++Ia++++ gRt++++k++w+++l
  TRIDC7AG022400.3  67 RGKFSQEEEQTILQLHTVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 112
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MGRPPSSDEN GLKKGPWTTE EDEKLMSYIQ KHGHGSWRSL PQLAGLNRCG KSCRLRWTNY  60
LKPDIKRGKF SQEEEQTILQ LHTVLGNKWS AIAKHLPGRT DNEIKNFWNT HLRKKLIKMG  120
IDPMTHRPRT DFFAALPQLI ALANLRQFIN QQPWDDHTAG LQAQTAQAAN LQYVQSLLHS  180
AASIAVAQNQ MPSITFDHT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.19e-93MYB family protein