PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG019350.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 474aa MW: 50597.1 Da PI: 4.4127

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG019350.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.4	2e-11	324	369	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L++l+P++ K +K+++L + ++Y+k Lq TRIDC7AG019350.11 324 HSIAERLRREKISERMKNLQDLVPNS-----NKADKSSMLDEIIDYVKFLQ 369 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MDYSNGSFFP SWPDNSASEN YSFVDGSVES YAEEGSMPPA GYFRARSNQN LTFDEHEQNP 60 AMLANGCLPY NTQTDLLSGE ILSEDKPSNS LMELPQLQNN GSLQSNLIPS GTLQCTSTPG 120 TFDLQLDTPG LLELPHALSS SIESNGSEVS AFLADVHAVS SASTLCSTFQ NVPSYMEPVS 180 LEAFSFQGIQ NAAMFNNTSH SNGNLSVFDE ATMASLHDSK EFLSGGISSF GTAEQSQLAG 240 SGLKAEQQEQ NVMCNIPLPF ASGSQMAVSE AQGISSTIHN NKSEYPVPIS HSADAQNKAN 300 SANGNSASAK PRARARRGQA TDPHSIAERL RREKISERMK NLQDLVPNSN KADKSSMLDE 360 IIDYVKFLQL QVKVLSMSRL GAPGAVLPLL AESQTEGHSN SPLSPPTASQ GLLDAAGPED 420 SLVFEQEVIK LMETSITNAM QYLQNKGLCL MPIALASAIS NQKGTSAAAV PPER

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MDYSNGSFFP SWPDNSASEN YSFVDGSVES YAEEGSMPPA GYFRARSNQN LTFDEHEQNP  60
AMLANGCLPY NTQTDLLSGE ILSEDKPSNS LMELPQLQNN GSLQSNLIPS GTLQCTSTPG  120
TFDLQLDTPG LLELPHALSS SIESNGSEVS AFLADVHAVS SASTLCSTFQ NVPSYMEPVS  180
LEAFSFQGIQ NAAMFNNTSH SNGNLSVFDE ATMASLHDSK EFLSGGISSF GTAEQSQLAG  240
SGLKAEQQEQ NVMCNIPLPF ASGSQMAVSE AQGISSTIHN NKSEYPVPIS HSADAQNKAN  300
SANGNSASAK PRARARRGQA TDPHSIAERL RREKISERMK NLQDLVPNSN KADKSSMLDE  360
IIDYVKFLQL QVKVLSMSRL GAPGAVLPLL AESQTEGHSN SPLSPPTASQ GLLDAAGPED  420
SLVFEQEVIK LMETSITNAM QYLQNKGLCL MPIALASAIS NQKGTSAAAV PPER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	2e-47	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG019350.11