PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG018910.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 490aa MW: 53856.2 Da PI: 4.8246

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG018910.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.2	6.2e-19	316	427	2	91
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.....................tekerrtraetrtgCkaklkvkke 71 fYneYA +GF ++k+ +++ ++++ ++t++C+++gk e+ + k++r++ + tgC+ak+ +++ TRIDC7AG018910.3 316 FYNEYAAICGFAIKKAGNYHAtkPGSKTVSRYTYRCNRSGKVVGEDVLeerkkqrqlkkqekigipppeKAKRKRKNFIQITGCQAKMIATLK 408 **************999984344677999*****9765544445667799*******98888999999*********99 PP FAR1 72 kdgkwevtkleleHnHelap 91 +kw+vt ++leHnH+l+p TRIDC7AG018910.3 409 -GDKWVVTVVDLEHNHTLSP 427 .9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MGTQVPGETM AQGTPISHGP VPVDPVTSQP YVGAQYVQQQ QAGTRLAFQT SSSPFATHEM 60 NFLGSGYMSY TQLLMAADQE VGIGGSQHSG QQQDSGGRGF CENDTYMITE RYGHLQGQDE 120 GGQPTRRQQA GNVDVGAEGF PSWSWDGNTA EGHQGCSYQP GYREQDSDDG DFDFDEGEDD 180 LDDDLDDEVA ASSSHGPSFP EDMSLDGGLG DDSAAAGSSH GPSFMDGMSF DDVSDNGKQI 240 DAHGKNKNVC DCDDQQEGKP VQQENVEHLS QEDILMFIES DSVCAAQAQT CSQEVRSHHV 300 PYVGMVFDSC DAAHAFYNEY AAICGFAIKK AGNYHATKPG SKTVSRYTYR CNRSGKVVGE 360 DVLEERKKQR QLKKQEKIGI PPPEKAKRKR KNFIQITGCQ AKMIATLKGD KWVVTVVDLE 420 HNHTLSPPDE SKYLRSHKKM TEEEKLFIRT FNSVQMPTRK IMAILSYLQG GDAPYTKKYV 480 SNVRTAINRE

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MGTQVPGETM AQGTPISHGP VPVDPVTSQP YVGAQYVQQQ QAGTRLAFQT SSSPFATHEM  60
NFLGSGYMSY TQLLMAADQE VGIGGSQHSG QQQDSGGRGF CENDTYMITE RYGHLQGQDE  120
GGQPTRRQQA GNVDVGAEGF PSWSWDGNTA EGHQGCSYQP GYREQDSDDG DFDFDEGEDD  180
LDDDLDDEVA ASSSHGPSFP EDMSLDGGLG DDSAAAGSSH GPSFMDGMSF DDVSDNGKQI  240
DAHGKNKNVC DCDDQQEGKP VQQENVEHLS QEDILMFIES DSVCAAQAQT CSQEVRSHHV  300
PYVGMVFDSC DAAHAFYNEY AAICGFAIKK AGNYHATKPG SKTVSRYTYR CNRSGKVVGE  360
DVLEERKKQR QLKKQEKIGI PPPEKAKRKR KNFIQITGCQ AKMIATLKGD KWVVTVVDLE  420
HNHTLSPPDE SKYLRSHKKM TEEEKLFIRT FNSVQMPTRK IMAILSYLQG GDAPYTKKYV  480
SNVRTAINRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	5e-14	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG018910.3