PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG018910.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 487aa MW: 53451.8 Da PI: 4.8689

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG018910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.3	5.9e-19	317	428	2	91
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.....................tekerrtraetrtgCkaklkvkke 71 fYneYA +GF ++k+ +++ ++++ ++t++C+++gk e+ + k++r++ + tgC+ak+ +++ TRIDC7AG018910.1 317 FYNEYAAICGFAIKKAGNYHAtkPGSKTVSRYTYRCNRSGKVVGEDVLeerkkqrqlkkqekigipppeKAKRKRKNFIQITGCQAKMIATLK 409 **************999984344677999*****9765544445667799*******98888999999*********99 PP FAR1 72 kdgkwevtkleleHnHelap 91 +kw+vt ++leHnH+l+p TRIDC7AG018910.1 410 -GDKWVVTVVDLEHNHTLSP 428 .9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MGTQVPGETM AQGTPISHGP VPVDPVTSVH PYVGAQYVQQ QQAGTRLAFQ TSSSPFATHE 60 MNFLGSGYMS YTQLLMAADQ EVGIGGSQHS GQQQDSGGRG FCENDTYMIT ERYGHLQGQD 120 EGGQPTRRQQ AGNVDVGAEG FPSWSWDGNT AEGHQGCSYQ PGYREQDSDD GDFDFDEGED 180 DLDDDLDDEV AASSSHGPSF PEDMSLDGGL GDDSAAAGSS HGPSFMDGMS FDDVSDNGKQ 240 IDAHGKNKNV CDCDDQQEGK PVQQENVEHL SQEDILMFIE SDSVCAAQAQ TCSQEVRSHH 300 VPYVGMVFDS CDAAHAFYNE YAAICGFAIK KAGNYHATKP GSKTVSRYTY RCNRSGKVVG 360 EDVLEERKKQ RQLKKQEKIG IPPPEKAKRK RKNFIQITGC QAKMIATLKG DKWVVTVVDL 420 EHNHTLSPPD ESKYLRSHKK MTEEEKLFIR TFNSVQMPTR KIMAILSYLQ GGDAPYTKKY 480 VSNVRTA

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MGTQVPGETM AQGTPISHGP VPVDPVTSVH PYVGAQYVQQ QQAGTRLAFQ TSSSPFATHE  60
MNFLGSGYMS YTQLLMAADQ EVGIGGSQHS GQQQDSGGRG FCENDTYMIT ERYGHLQGQD  120
EGGQPTRRQQ AGNVDVGAEG FPSWSWDGNT AEGHQGCSYQ PGYREQDSDD GDFDFDEGED  180
DLDDDLDDEV AASSSHGPSF PEDMSLDGGL GDDSAAAGSS HGPSFMDGMS FDDVSDNGKQ  240
IDAHGKNKNV CDCDDQQEGK PVQQENVEHL SQEDILMFIE SDSVCAAQAQ TCSQEVRSHH  300
VPYVGMVFDS CDAAHAFYNE YAAICGFAIK KAGNYHATKP GSKTVSRYTY RCNRSGKVVG  360
EDVLEERKKQ RQLKKQEKIG IPPPEKAKRK RKNFIQITGC QAKMIATLKG DKWVVTVVDL  420
EHNHTLSPPD ESKYLRSHKK MTEEEKLFIR TFNSVQMPTR KIMAILSYLQ GGDAPYTKKY  480
VSNVRTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	5e-14	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG018910.1