PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG017900.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 659aa MW: 72267.8 Da PI: 6.4005 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.4 | 3.4e-28 | 218 | 271 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl TRIDC7AG017900.2 218 RPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 271 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.8 | 2.2e-12 | 220 | 270 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ +++t++++ s++qky+ TRIDC7AG017900.2 220 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 270 678********************************99*************7 PP | |||||||
3 | Response_reg | 78.3 | 2.6e-26 | 30 | 138 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ +++l+++l++ +y +v+++ ++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++ +ge + +l+ + TRIDC7AG017900.2 30 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVLKGIT 120 799********************.***************99999********************87754.558******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +eel++ TRIDC7AG017900.2 121 HGACDYLLKPVRIEELRN 138 ****************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 659 aa Download sequence |
MLLDAMMMEA RKGMMERERE RDQFPVGMRV LAVDDDPVCL KVLEVLLRRC QYHVTTTNQA 60 ATALRLLREN KDMFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSVNG ETKSVLKGIT 120 HGACDYLLKP VRIEELRNVW QHVVRRKFSN REPNSNLDLC KEISKPPSAD SYHRLGQATC 180 DSHRSCDQSN RAGKKRKEPH SEEEDEGEDN DDAAGSKRPR VVWSVELHRK FVAAVNQLGI 240 DKAVPKRILE LMNVEKLTRE NVASHLQKYR LYLRRLSAVA SQQASIAAAF GGRDPFLHMG 300 AFEGLHSYHQ PFAPSAALPS FNPHGLLSSA GAAAFGLQDL ASPKANQCSS SNGAVSHCAG 360 DTNKFHIVSL QDNQQADLSQ GLTSSSLGQP QLQQKWIHQE TNDLCSVFSG GALANTLSGT 420 LQRVTSSSLP PEDLLECTTH IKVGAHPSIG IPTASSGLLE RSVGVSADFR DSCISQRCAL 480 LISDGFSVDK LPLHIPFDRV GATKLDASFV AGEHEMDQKG IFSERMGVSV CPSESLIVAS 540 NAKCRASSSG STILPLPRDT ERHSKYLQFG AASNSRHRMD GMRQDHRLNN DGFSYDGGAI 600 VPEQTDMYDL GVPKLQGGFN SSSCNFDGLL NSIIKVENDE VPFNENDLGC ELFPLGACI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-104 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG017900.2 |